CPG ID : 11_0333_00 Gene Name : paired box 6
NCBI Gene ID : 5080 NCBI RefSeq : NM_001368894 NCBI Protein: NP_001355823
MANE Gene ID : ENSG00000007372 MANE Select ID : ENST00000640368 MANE Protein ID : ENSP00000492024
Chromosome : NC_000011.10 Start : 31789026 End : 31811322
Strand : - MANE Plus Clinical :
GSE All Transcripts GTEx v9 GTEx v8
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS MANE
Select
Transcript ID Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type
(GENCODE v26)
CDS
length
1 19.65 18.09 protein_coding 1269 19.46 P:1 ENST00000639916 2 1.29 15.40 1 1.94 24.55 protein_coding 1269
7 4.84 4.46 protein_coding 1269 4.80 P:1 ENST00000640610 7 0.28 3.38 2 0.74 9.36 protein_coding 1269
11 2.09 1.92 processed_transcript 0 ENST00000464174 1 2.00 23.86 3 0.63 7.89 processed_transcript 0
ENST00000379129 4 0.41 5.15 protein_coding 1311
27 0.44 0.41 protein_coding 1311 0.44 ENST00000639409 32 0.02 0.28 5 0.27 3.36 protein_coding 1311
16 1.18 1.08 retained_intron 0 ENST00000470027 9 0.24 2.88 6 0.22 2.77 retained_intron 0
ENST00000638903 12 0.17 2.01 7 0.21 2.71 protein_coding 1311
ENST00000530373 19 0.07 0.79 8 0.21 2.71 processed_transcript 0
10 2.09 1.92 retained_intron 0 ENST00000640038 33 0.02 0.26 9 0.21 2.69 retained_intron 0
ENST00000379115 23 0.05 0.62 10 0.21 2.63 protein_coding 1007
ENST00000474783 10 0.24 2.81 11 0.21 2.60 retained_intron 0
12 1.39 1.28 protein_coding 861 1.37 ENST00000638629 20 0.07 0.78 12 0.19 2.42 protein_coding 861
33 0.31 0.29 retained_intron 0 ENST00000532175 13 0.18 2.26 retained_intron 0
ENST00000533333 16 0.08 0.98 14 0.17 2.13 retained_intron 0
ENST00000534390 15 0.14 1.76 retained_intron 0
26 0.45 0.42 retained_intron 0 ENST00000640172 28 0.03 0.40 16 0.14 1.75 retained_intron 0
41 0.10 0.09 processed_transcript 0 ENST00000638278 53 0.00 0.05 17 0.14 1.71 processed_transcript 0
18 0.98 0.91 protein_coding 1269 0.97 P:1 ENST00000379109 27 0.03 0.41 18 0.13 1.60 protein_coding 1269
ENST00000379132 19 0.11 1.37 protein_coding 1269
17 1.14 1.05 protein_coding 833 1.13 ENST00000639109 48 0.01 0.08 20 0.10 1.24 protein_coding 833
37 0.21 0.19 protein_coding 1257 0.21 ENST00000639950 5 0.40 4.80 21 0.08 1.04 protein_coding 1257
42 0.03 0.03 retained_intron 0 ENST00000471303 21 0.06 0.67 22 0.08 0.98 retained_intron 0
8 3.76 3.47 protein_coding 843 3.73 ENST00000640872 8 0.27 3.28 23 0.06 0.80 protein_coding 843
ENST00000640735 24 0.06 0.71 retained_intron 0
3 13.25 12.20 protein_coding 1311 13.12 M ENST00000640368 4 0.49 5.83 25 0.06 0.70 protein_coding 1311
22 0.57 0.52 retained_intron 0 ENST00000527769 59 0.00 0.02 26 0.06 0.70 retained_intron 0
28 0.42 0.38 protein_coding 716 0.41 ENST00000638762 38 0.02 0.19 27 0.05 0.67 protein_coding 716
ENST00000638963 22 0.05 0.65 28 0.05 0.66 protein_coding 1422
ENST00000379123 54 0.00 0.05 29 0.05 0.64 protein_coding 848
ENST00000639203 30 0.05 0.62 processed_transcript 0
23 0.52 0.48 protein_coding 1311 0.52 ENST00000379107 55 0.00 0.03 31 0.05 0.62 protein_coding 1311
ENST00000531910 56 0.00 0.02 32 0.04 0.55 retained_intron 0
ENST00000639943 41 0.01 0.17 33 0.04 0.51 protein_coding 943
36 0.23 0.21 retained_intron 0 ENST00000532916 34 0.04 0.45 retained_intron 0
35 0.24 0.22 protein_coding 848 0.23 ENST00000638250 30 0.03 0.31 35 0.04 0.45 protein_coding 848
ENST00000640963 52 0.00 0.06 36 0.03 0.41 protein_coding 1148
ENST00000638685 35 0.02 0.23 37 0.03 0.41 protein_coding 909
ENST00000494377 39 0.02 0.18 38 0.03 0.38 retained_intron 0
6 7.05 6.50 protein_coding 1269 6.98 P:1 ENST00000241001 14 0.15 1.83 39 0.03 0.35 protein_coding 1269
ENST00000533156 40 0.03 0.34 processed_transcript 0
34 0.24 0.22 protein_coding 789 0.24 ENST00000638802 15 0.14 1.65 41 0.03 0.33 protein_coding 789
13 1.34 1.23 protein_coding 861 1.33 ENST00000639386 13 0.16 1.86 42 0.02 0.31 protein_coding 861
ENST00000639394 43 0.01 0.15 43 0.02 0.29 nonsense_mediated_decay 492
19 0.94 0.86 protein_coding 861 0.93 ENST00000481563 18 0.07 0.85 44 0.02 0.26 protein_coding 861
ENST00000639006 45 0.01 0.12 45 0.02 0.25 protein_coding 747
39 0.20 0.18 processed_transcript 0 ENST00000640617 46 0.02 0.24 processed_transcript 0
ENST00000638878 47 0.01 0.10 47 0.02 0.23 protein_coding 695
ENST00000640431 46 0.01 0.11 48 0.02 0.23 protein_coding 1112
ENST00000534353 49 0.02 0.21 processed_transcript 0
32 0.31 0.29 protein_coding 1257 0.31 ENST00000379111 44 0.01 0.14 50 0.02 0.21 protein_coding 1257
5 8.07 7.43 protein_coding 1311 7.99 ENST00000638914 3 0.88 10.47 51 0.02 0.20 protein_coding 1269
ENST00000640251 49 0.01 0.07 52 0.02 0.19 processed_transcript 0
24 0.51 0.47 protein_coding 789 0.51 ENST00000639079 31 0.02 0.28 53 0.01 0.18 protein_coding 789
ENST00000640975 51 0.01 0.06 54 0.01 0.17 protein_coding 1311
ENST00000638965 55 0.01 0.16 protein_coding 666
ENST00000638755 56 0.01 0.16 protein_coding 1161
15 1.22 1.12 protein_coding 1267 1.21 ENST00000640287 42 0.01 0.16 57 0.01 0.15 protein_coding 1267
ENST00000525535 58 0.01 0.15 protein_coding 10
ENST00000640125 59 0.00 0.02 59 0.01 0.15 protein_coding 861
ENST00000638696 60 0.01 0.12 protein_coding 1203
ENST00000640766 24 0.05 0.54 61 0.01 0.10 protein_coding 849
ENST00000530714 58 0.00 0.02 62 0.01 0.09 processed_transcript 0
ENST00000455099 57 0.00 0.02 63 0.01 0.09 protein_coding 724
20 0.82 0.76 protein_coding 1252 0.81 ENST00000524853 25 0.04 0.51 64 0.01 0.09 protein_coding 1252
40 0.11 0.10 protein_coding 849 0.10 ENST00000639061 40 0.01 0.17 65 0.01 0.09 protein_coding 849
ENST00000438681 66 0.01 0.08 protein_coding 960
14 1.24 1.15 protein_coding 781 1.23 ENST00000638346 34 0.02 0.25 67 0.01 0.07 protein_coding 781
ENST00000639920 68 0.01 0.07 protein_coding 218
30 0.39 0.36 protein_coding 1103 0.38 ENST00000423822 26 0.03 0.42 69 0.01 0.06 protein_coding 1103
ENST00000639548 70 0.00 0.06 protein_coding 861
31 0.35 0.32 retained_intron 0 ENST00000638913 36 0.02 0.22 71 0.00 0.06 retained_intron 0
ENST00000638853 72 0.00 0.05 protein_coding 833
ENST00000639054 29 0.03 0.32 73 0.00 0.05 retained_intron 0
ENST00000640819 74 0.00 0.04 processed_transcript 0
21 0.68 0.62 protein_coding 1206 0.67 ENST00000639034 75 0.00 0.04 protein_coding 1206
38 0.21 0.19 protein_coding 1241 0.20 ENST00000640460 37 0.02 0.19 76 0.00 0.03 protein_coding 1241
25 0.47 0.43 protein_coding 1106 0.46 ENST00000640613 17 0.08 0.97 77 0.00 0.03 protein_coding 1106
ENST00000640242 78 0.00 0.02 protein_coding 1024
ENST00000640335 79 0.00 0.02 protein_coding 617
29 0.42 0.38 protein_coding 1248 0.41 ENST00000640684 50 0.01 0.06 80 0.00 0.02 protein_coding 1248
4 11.89 10.95 protein_coding 1311 11.78 ENST00000606377 6 0.39 4.63 81 0.00 0.01 protein_coding 1311
9 3.57 3.29 protein_coding 1311 3.53 ENST00000419022 11 0.19 2.32 82 0.00 0.00 protein_coding 1311

GSE
MANE
Select
No Match
Transcript ID
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS
ENST00000643871 2 14.68 13.52 protein_coding 1269 14.54 P:1



GSE  ENSG00000007372_PAX6



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