CPG ID : 11_0333_00 Gene Name : paired box 6
NCBI Gene ID : 5080 NCBI RefSeq : NM_001368894 NCBI Protein: NP_001355823
MANE Gene ID : ENSG00000007372 MANE Select ID : ENST00000640368 MANE Protein ID : ENSP00000492024
Chromosome : NC_000011.10 Start : 31789026 End : 31811322
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000639916 protein_coding 1269 1 1.94 24.55 2 1.29 15.40 1 19.65 18.09 protein_coding 1269 19.46 P:1
ENST00000640610 protein_coding 1269 2 0.74 9.36 7 0.28 3.38 7 4.84 4.46 protein_coding 1269 4.80 P:1
ENST00000464174 processed_transcript 0 3 0.63 7.89 1 2.00 23.86 11 2.09 1.92 processed_transcript 0
ENST00000379129 protein_coding 1311 4 0.41 5.15
ENST00000639409 protein_coding 1311 5 0.27 3.36 32 0.02 0.28 27 0.44 0.41 protein_coding 1311 0.44
ENST00000470027 retained_intron 0 6 0.22 2.77 9 0.24 2.88 16 1.18 1.08 retained_intron 0
ENST00000638903 protein_coding 1311 7 0.21 2.71 12 0.17 2.01
ENST00000530373 processed_transcript 0 8 0.21 2.71 19 0.07 0.79
ENST00000640038 retained_intron 0 9 0.21 2.69 33 0.02 0.26 10 2.09 1.92 retained_intron 0
ENST00000379115 protein_coding 1007 10 0.21 2.63 23 0.05 0.62
ENST00000474783 retained_intron 0 11 0.21 2.60 10 0.24 2.81
ENST00000638629 protein_coding 861 12 0.19 2.42 20 0.07 0.78 12 1.39 1.28 protein_coding 861 1.37
ENST00000532175 retained_intron 0 13 0.18 2.26 33 0.31 0.29 retained_intron 0
ENST00000533333 retained_intron 0 14 0.17 2.13 16 0.08 0.98
ENST00000534390 retained_intron 0 15 0.14 1.76
ENST00000640172 retained_intron 0 16 0.14 1.75 28 0.03 0.40 26 0.45 0.42 retained_intron 0
ENST00000638278 processed_transcript 0 17 0.14 1.71 53 0.00 0.05 41 0.10 0.09 processed_transcript 0
ENST00000379109 protein_coding 1269 18 0.13 1.60 27 0.03 0.41 18 0.98 0.91 protein_coding 1269 0.97 P:1
ENST00000379132 protein_coding 1269 19 0.11 1.37
ENST00000639109 protein_coding 833 20 0.10 1.24 48 0.01 0.08 17 1.14 1.05 protein_coding 833 1.13
ENST00000639950 protein_coding 1257 21 0.08 1.04 5 0.40 4.80 37 0.21 0.19 protein_coding 1257 0.21
ENST00000471303 retained_intron 0 22 0.08 0.98 21 0.06 0.67 42 0.03 0.03 retained_intron 0
ENST00000640872 protein_coding 843 23 0.06 0.80 8 0.27 3.28 8 3.76 3.47 protein_coding 843 3.73
ENST00000640735 retained_intron 0 24 0.06 0.71
ENST00000640368 protein_coding 1311 25 0.06 0.70 4 0.49 5.83 3 13.25 12.20 protein_coding 1311 13.12
ENST00000527769 retained_intron 0 26 0.06 0.70 59 0.00 0.02 22 0.57 0.52 retained_intron 0
ENST00000638762 protein_coding 716 27 0.05 0.67 38 0.02 0.19 28 0.42 0.38 protein_coding 716 0.41
ENST00000638963 protein_coding 1422 28 0.05 0.66 22 0.05 0.65
ENST00000379123 protein_coding 848 29 0.05 0.64 54 0.00 0.05
ENST00000639203 processed_transcript 0 30 0.05 0.62
ENST00000379107 protein_coding 1311 31 0.05 0.62 55 0.00 0.03 23 0.52 0.48 protein_coding 1311 0.52
ENST00000531910 retained_intron 0 32 0.04 0.55 56 0.00 0.02
ENST00000639943 protein_coding 943 33 0.04 0.51 41 0.01 0.17
ENST00000532916 retained_intron 0 34 0.04 0.45 36 0.23 0.21 retained_intron 0
ENST00000638250 protein_coding 848 35 0.04 0.45 30 0.03 0.31 35 0.24 0.22 protein_coding 848 0.23
ENST00000640963 protein_coding 1148 36 0.03 0.41 52 0.00 0.06
ENST00000638685 protein_coding 909 37 0.03 0.41 35 0.02 0.23
ENST00000494377 retained_intron 0 38 0.03 0.38 39 0.02 0.18
ENST00000241001 protein_coding 1269 39 0.03 0.35 14 0.15 1.83 6 7.05 6.50 protein_coding 1269 6.98 P:1
ENST00000533156 processed_transcript 0 40 0.03 0.34
ENST00000638802 protein_coding 789 41 0.03 0.33 15 0.14 1.65 34 0.24 0.22 protein_coding 789 0.24
ENST00000639386 protein_coding 861 42 0.02 0.31 13 0.16 1.86 13 1.34 1.23 protein_coding 861 1.33
ENST00000639394 nonsense_mediated_decay 492 43 0.02 0.29 43 0.01 0.15
ENST00000481563 protein_coding 861 44 0.02 0.26 18 0.07 0.85 19 0.94 0.86 protein_coding 861 0.93
ENST00000639006 protein_coding 747 45 0.02 0.25 45 0.01 0.12
ENST00000640617 processed_transcript 0 46 0.02 0.24 39 0.20 0.18 processed_transcript 0
ENST00000638878 protein_coding 695 47 0.02 0.23 47 0.01 0.10
ENST00000640431 protein_coding 1112 48 0.02 0.23 46 0.01 0.11
ENST00000534353 processed_transcript 0 49 0.02 0.21
ENST00000379111 protein_coding 1257 50 0.02 0.21 44 0.01 0.14 32 0.31 0.29 protein_coding 1257 0.31
ENST00000638914 protein_coding 1269 51 0.02 0.20 3 0.88 10.47 5 8.07 7.43 protein_coding 1311 7.99
ENST00000640251 processed_transcript 0 52 0.02 0.19 49 0.01 0.07
ENST00000639079 protein_coding 789 53 0.01 0.18 31 0.02 0.28 24 0.51 0.47 protein_coding 789 0.51
ENST00000640975 protein_coding 1311 54 0.01 0.17 51 0.01 0.06
ENST00000638965 protein_coding 666 55 0.01 0.16
ENST00000638755 protein_coding 1161 56 0.01 0.16
ENST00000640287 protein_coding 1267 57 0.01 0.15 42 0.01 0.16 15 1.22 1.12 protein_coding 1267 1.21
ENST00000525535 protein_coding 10 58 0.01 0.15
ENST00000640125 protein_coding 861 59 0.01 0.15 59 0.00 0.02
ENST00000638696 protein_coding 1203 60 0.01 0.12
ENST00000640766 protein_coding 849 61 0.01 0.10 24 0.05 0.54
ENST00000530714 processed_transcript 0 62 0.01 0.09 58 0.00 0.02
ENST00000455099 protein_coding 724 63 0.01 0.09 57 0.00 0.02
ENST00000524853 protein_coding 1252 64 0.01 0.09 25 0.04 0.51 20 0.82 0.76 protein_coding 1252 0.81
ENST00000639061 protein_coding 849 65 0.01 0.09 40 0.01 0.17 40 0.11 0.10 protein_coding 849 0.10
ENST00000438681 protein_coding 960 66 0.01 0.08
ENST00000638346 protein_coding 781 67 0.01 0.07 34 0.02 0.25 14 1.24 1.15 protein_coding 781 1.23
ENST00000639920 protein_coding 218 68 0.01 0.07
ENST00000423822 protein_coding 1103 69 0.01 0.06 26 0.03 0.42 30 0.39 0.36 protein_coding 1103 0.38
ENST00000639548 protein_coding 861 70 0.00 0.06
ENST00000638913 retained_intron 0 71 0.00 0.06 36 0.02 0.22 31 0.35 0.32 retained_intron 0
ENST00000638853 protein_coding 833 72 0.00 0.05
ENST00000639054 retained_intron 0 73 0.00 0.05 29 0.03 0.32
ENST00000640819 processed_transcript 0 74 0.00 0.04
ENST00000639034 protein_coding 1206 75 0.00 0.04 21 0.68 0.62 protein_coding 1206 0.67
ENST00000640460 protein_coding 1241 76 0.00 0.03 37 0.02 0.19 38 0.21 0.19 protein_coding 1241 0.20
ENST00000640613 protein_coding 1106 77 0.00 0.03 17 0.08 0.97 25 0.47 0.43 protein_coding 1106 0.46
ENST00000640242 protein_coding 1024 78 0.00 0.02
ENST00000640335 protein_coding 617 79 0.00 0.02
ENST00000640684 protein_coding 1248 80 0.00 0.02 50 0.01 0.06 29 0.42 0.38 protein_coding 1248 0.41
ENST00000606377 protein_coding 1311 81 0.00 0.01 6 0.39 4.63 4 11.89 10.95 protein_coding 1311 11.78
ENST00000419022 protein_coding 1311 82 0.00 0.00 11 0.19 2.32 9 3.57 3.29 protein_coding 1311 3.53

GSE GTEx V34
MANE
Match
No Match
Transcript ID
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000643871 2 14.68 13.52 protein_coding 1269 14.54 P:1



GSE  ENSG00000007372_PAX6



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