| CPG ID : 12_0059_00 | Gene Name : intermediate filament family orphan 1 | |
|---|---|---|
| NCBI Gene ID : 25900 | NCBI RefSeq : NM_001193457 | NCBI Protein: NP_001180386 |
|---|---|---|
| MANE Gene ID : ENSG00000010295 | MANE Select ID : ENST00000619571 | MANE Protein ID : ENSP00000482285 |
| Chromosome : NC_000012.12 | Start : 6539539 | End : 6556042 |
| Strand : - | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000396830 | retained_intron | 0 | 1 | 13.53 | 48.07 | 3 | 7.75 | 12.91 | retained_intron | 0 | |||||||||
| ENST00000488007 | retained_intron | 0 | 2 | 4.69 | 16.67 | 2 | 0.31 | 9.29 | 9 | 0.82 | 1.36 | retained_intron | 0 | ||||||
| ENST00000336604 | protein_coding | 1689 | 3 | 3.16 | 11.22 | ☀ | 6 | 3.07 | 5.12 | protein_coding | 1689 | 10.11 | P:4 | ||||||
| ENST00000472558 | retained_intron | 0 | 4 | 2.26 | 8.05 | 1 | 2.79 | 84.21 | 2 | 16.11 | 26.84 | retained_intron | 0 | ||||||
| ENST00000356896 | protein_coding | 1692 | 5 | 1.59 | 5.67 | 4 | 7.27 | 12.12 | protein_coding | 1692 | 23.94 | A:1 | |||||||
| ENST00000396840 | protein_coding | 1680 | 6 | 1.35 | 4.81 | 7 | 0.01 | 0.26 | 1 | 18.23 | 30.37 | ☀ | protein_coding | 1680 | 59.99 | A:1 | |||
| ☀ | ENST00000619571 | protein_coding | 1716 | 7 | 0.76 | 2.71 | 6 | 0.03 | 0.92 | 8 | 1.15 | 1.92 | protein_coding | 1716 | 3.80 | A:1 | |||
| ENST00000471408 | retained_intron | 0 | 8 | 0.39 | 1.38 | 4 | 0.06 | 1.78 | 7 | 1.77 | 2.95 | retained_intron | 0 | ||||||
| ENST00000465801 | protein_coding | 768 | 9 | 0.23 | 0.81 | 9 | 0.00 | 0.13 | |||||||||||
| ENST00000487279 | nonsense_mediated_decay | 795 | 10 | 0.13 | 0.46 | 5 | 0.04 | 1.35 | 5 | 3.19 | 5.32 | nonsense_mediated_decay | 795 | ||||||
| ENST00000615885 | protein_coding | 771 | 11 | 0.03 | 0.12 | 8 | 0.01 | 0.21 | 10 | 0.66 | 1.10 | protein_coding | 771 | 2.17 | |||||
| ENST00000436152 | protein_coding | 771 | 12 | 0.01 | 0.04 | 3 | 0.06 | 1.85 | ☀ | ||||||||||