CPG ID : 11_0357_00 Gene Name : CD44 molecule (IN blood group)
NCBI Gene ID : 960 NCBI RefSeq : NM_000610 NCBI Protein: NP_000601
MANE Gene ID : ENSG00000026508 MANE Select ID : ENST00000428726 MANE Protein ID : ENSP00000398632
Chromosome : NC_000011.10 Start : 35139171 End : 35232402
Strand : + MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000263398 protein_coding 1086 1 39.89 38.57 1 73.91 91.47 1 556.88 83.81 protein_coding 1086 85.89 A:2
ENST00000425428 nonsense_mediated_decay 243 2 9.21 8.90 12 0.22 0.27 12 0.28 0.04 nonsense_mediated_decay 243
ENST00000527326 retained_intron 0 3 5.99 5.79 18 0.04 0.04 5 11.67 1.76 retained_intron 0
ENST00000433892 protein_coding 1482 4 4.35 4.20 2 1.59 1.96 2 49.32 7.42 protein_coding 1482 7.61 A:2
ENST00000639002 protein_coding 528 5 4.27 4.13
ENST00000415148 protein_coding 2100 6 4.22 4.08 6 0.56 0.69 6 9.27 1.40 protein_coding 2100 1.43 P:4
ENST00000352818 protein_coding 1023 7 3.74 3.62 34 0.00 0.00 10 0.40 0.06 protein_coding 1023 0.06 A:2
ENST00000526669 protein_coding 621 8 3.50 3.38 16 0.08 0.10
ENST00000279452 protein_coding 862 9 3.27 3.17 24 0.00 0.00 14 0.13 0.02 protein_coding 862 0.02
ENST00000532339 retained_intron 0 10 2.98 2.89 5 0.69 0.86
ENST00000528086 processed_transcript 0 11 2.45 2.37 21 0.01 0.01
ENST00000428726 protein_coding 2229 12 2.31 2.24 8 0.34 0.42 4 12.67 1.91 protein_coding 2229 1.95 A:2
ENST00000531118 retained_intron 0 13 2.27 2.19 4 0.79 0.98 8 3.63 0.55 retained_intron 0
ENST00000534296 retained_intron 0 14 2.06 1.99 13 0.15 0.19
ENST00000525469 protein_coding 249 15 1.98 1.91 23 0.00 0.01 9 0.80 0.12 protein_coding 249 0.12
ENST00000434472 protein_coding 1290 16 1.51 1.46 10 0.23 0.28 7 4.09 0.62 protein_coding 1290 0.63 A:2
ENST00000531110 protein_coding 749 17 1.25 1.21 20 0.01 0.01
ENST00000526553 protein_coding 571 18 1.01 0.97 26 0.00 0.00
ENST00000528922 processed_transcript 0 19 0.95 0.92 3 0.90 1.11
ENST00000525348 retained_intron 0 20 0.93 0.90 22 0.01 0.01
ENST00000531141 retained_intron 0 21 0.85 0.82 15 0.11 0.13 13 0.17 0.03 retained_intron 0
ENST00000442151 protein_coding 883 22 0.73 0.70 11 0.22 0.27 15 0.10 0.02 protein_coding 883 0.02
ENST00000526025 protein_coding 237 23 0.71 0.69 9 0.25 0.31 3 14.57 2.19 protein_coding 237 2.25
ENST00000278385 protein_coding 697 24 0.70 0.68 29 0.00 0.00 16 0.07 0.01 protein_coding 697 0.01
ENST00000525241 retained_intron 0 25 0.63 0.61 28 0.00 0.00 11 0.30 0.05 retained_intron 0
ENST00000533222 protein_coding 581 26 0.30 0.29 30 0.00 0.00 19 0.03 0.01 protein_coding 581 0.01
ENST00000525688 protein_coding 560 27 0.21 0.21 17 0.06 0.08 18 0.03 0.01 protein_coding 560 0.01
ENST00000525293 retained_intron 0 28 0.20 0.19 7 0.44 0.54
ENST00000525211 protein_coding 747 29 0.19 0.19 25 0.00 0.00
ENST00000528672 protein_coding 586 30 0.18 0.18
ENST00000534082 retained_intron 0 31 0.15 0.15 19 0.02 0.02 20 0.03 0.01 retained_intron 0
ENST00000527889 protein_coding 543 32 0.09 0.09 35 0.00 0.00
ENST00000528455 protein_coding 687 33 0.08 0.08 27 0.00 0.00
ENST00000525685 protein_coding 728 34 0.07 0.06 33 0.00 0.00
ENST00000525209 processed_transcript 0 35 0.05 0.05 14 0.15 0.18
ENST00000531873 protein_coding 584 36 0.05 0.05 32 0.00 0.00
ENST00000526000 protein_coding 722 37 0.03 0.03
ENST00000278386 protein_coding 420 38 0.03 0.03 31 0.00 0.00 17 0.03 0.01 protein_coding 420 0.01
ENST00000524922 protein_coding 352 39 0.01 0.01



GSE  ENSG00000026508_CD44



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