| CPG ID : 08_0365_00 | Gene Name : staufen double-stranded RNA binding protein 2 | |
|---|---|---|
| NCBI Gene ID : 27067 | NCBI RefSeq : NM_001164380 | NCBI Protein: NP_001157852 |
|---|---|---|
| MANE Gene ID : ENSG00000040341 | MANE Select ID : ENST00000524300 | MANE Protein ID : ENSP00000428756 |
| Chromosome : NC_000008.11 | Start : 73420369 | End : 73746840 |
| Strand : - | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000355780 | protein_coding | 1440 | 1 | 5.24 | 29.08 | ☀ | 1 | 3.97 | 36.76 | ☀ | 1 | 118.86 | 52.58 | ☀ | protein_coding | 1440 | 55.44 | ||
| ENST00000522695 | protein_coding | 1617 | 2 | 3.32 | 18.42 | 18 | 0.02 | 0.23 | 16 | 1.08 | 0.48 | protein_coding | 1617 | 0.50 | |||||
| ENST00000523533 | protein_coding | 489 | 3 | 3.24 | 18.00 | 2 | 2.24 | 20.77 | 3 | 17.15 | 7.59 | protein_coding | 489 | 8.00 | |||||
| ☀ | ENST00000524300 | protein_coding | 1713 | 4 | 1.13 | 6.28 | 3 | 1.90 | 17.58 | 4 | 17.09 | 7.56 | protein_coding | 1713 | 7.97 | P:1 | |||
| ENST00000521447 | protein_coding | 612 | 5 | 0.92 | 5.13 | 17 | 0.03 | 0.24 | 13 | 2.08 | 0.92 | protein_coding | 612 | 0.97 | |||||
| ENST00000521210 | protein_coding | 1515 | 6 | 0.58 | 3.23 | 5 | 0.53 | 4.89 | |||||||||||
| ENST00000522962 | processed_transcript | 0 | 7 | 0.55 | 3.05 | 6 | 0.27 | 2.52 | 8 | 3.48 | 1.54 | processed_transcript | 0 | ||||||
| ENST00000517542 | protein_coding | 1422 | 8 | 0.46 | 2.54 | 8 | 0.15 | 1.39 | 2 | 26.29 | 11.63 | protein_coding | 1422 | 12.26 | |||||
| ENST00000520872 | processed_transcript | 0 | 9 | 0.38 | 2.13 | 7 | 0.18 | 1.69 | 10 | 3.27 | 1.45 | processed_transcript | 0 | ||||||
| ENST00000521451 | protein_coding | 876 | 10 | 0.36 | 2.01 | 22 | 0.01 | 0.10 | |||||||||||
| ENST00000518767 | protein_coding | 960 | 11 | 0.29 | 1.61 | 25 | 0.00 | 0.04 | 11 | 2.81 | 1.24 | protein_coding | 960 | 1.31 | |||||
| ENST00000524104 | protein_coding | 318 | 12 | 0.19 | 1.05 | 4 | 0.81 | 7.50 | 5 | 8.64 | 3.82 | protein_coding | 318 | 4.03 | |||||
| ENST00000521293 | processed_transcript | 0 | 13 | 0.18 | 0.99 | 20 | 0.23 | 0.10 | processed_transcript | 0 | |||||||||
| ENST00000522818 | processed_transcript | 0 | 14 | 0.13 | 0.72 | 24 | 0.01 | 0.07 | 18 | 0.37 | 0.16 | processed_transcript | 0 | ||||||
| ENST00000524113 | retained_intron | 0 | 15 | 0.13 | 0.70 | 16 | 0.03 | 0.29 | 12 | 2.15 | 0.95 | retained_intron | 0 | ||||||
| ENST00000518981 | nonsense_mediated_decay | 1173 | 16 | 0.12 | 0.66 | 19 | 0.02 | 0.18 | 19 | 0.27 | 0.12 | nonsense_mediated_decay | 1173 | ||||||
| ENST00000520945 | processed_transcript | 0 | 17 | 0.10 | 0.58 | 22 | 0.03 | 0.01 | processed_transcript | 0 | |||||||||
| ENST00000523558 | protein_coding | 1197 | 18 | 0.10 | 0.56 | 9 | 0.13 | 1.23 | 9 | 3.35 | 1.48 | protein_coding | 1197 | 1.56 | |||||
| ENST00000521845 | processed_transcript | 0 | 19 | 0.09 | 0.48 | 23 | 0.01 | 0.10 | |||||||||||
| ENST00000522061 | processed_transcript | 0 | 20 | 0.08 | 0.46 | 13 | 0.05 | 0.49 | 21 | 0.11 | 0.05 | processed_transcript | 0 | ||||||
| ENST00000522509 | protein_coding | 1440 | 21 | 0.08 | 0.45 | 12 | 0.07 | 0.62 | 7 | 6.44 | 2.85 | protein_coding | 1440 | 3.00 | |||||
| ENST00000521736 | protein_coding | 191 | 22 | 0.08 | 0.43 | 15 | 0.04 | 0.33 | 17 | 0.96 | 0.42 | protein_coding | 191 | 0.45 | |||||
| ENST00000519961 | protein_coding | 1536 | 23 | 0.08 | 0.43 | 10 | 0.12 | 1.14 | 15 | 1.27 | 0.56 | protein_coding | 1536 | 0.59 | |||||
| ENST00000519818 | processed_transcript | 0 | 24 | 0.06 | 0.35 | 21 | 0.01 | 0.13 | 14 | 1.78 | 0.79 | processed_transcript | 0 | ||||||
| ENST00000521419 | protein_coding | 378 | 25 | 0.05 | 0.29 | 14 | 0.05 | 0.48 | |||||||||||
| ENST00000521727 | protein_coding | 1476 | 26 | 0.02 | 0.14 | 20 | 0.02 | 0.16 | 6 | 8.37 | 3.70 | protein_coding | 1476 | 3.90 | |||||
| ENST00000524191 | processed_transcript | 0 | 27 | 0.02 | 0.10 | 11 | 0.12 | 1.09 | |||||||||||
| ENST00000518502 | protein_coding | 405 | 28 | 0.01 | 0.07 | 26 | 0.00 | 0.01 | |||||||||||
| ENST00000523160 | processed_transcript | 0 | 29 | 0.01 | 0.05 | ||||||||||||||