CPG ID : 14_0450_00 Gene Name : tyrosyl-DNA phosphodiesterase 1
NCBI Gene ID : 55775 NCBI RefSeq : NM_018319 NCBI Protein: NP_060789
MANE Gene ID : ENSG00000042088 MANE Select ID : ENST00000335725 MANE Protein ID : ENSP00000337353
Chromosome : NC_000014.9 Start : 89955927 End : 90044764
Strand : + MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000335725 protein_coding 1827 1 2.37 46.13 1 6.12 85.04 2 10.78 39.30 protein_coding 1827 39.69 P:1
ENST00000393454 protein_coding 1827 2 1.15 22.33 2 0.46 6.39 1 11.45 41.77 protein_coding 1827 42.18 P:1
ENST00000554180 protein_coding 839 3 0.27 5.23 9 0.05 0.64 3 1.45 5.29 protein_coding 839 5.35
ENST00000556867 protein_coding 455 4 0.25 4.80 10 0.04 0.58 4 1.37 4.98 protein_coding 455 5.03
ENST00000555880 protein_coding 1737 5 0.19 3.60 4 0.10 1.37 9 0.14 0.51 protein_coding 1737 0.52
ENST00000556063 protein_coding 844 6 0.14 2.70 11 0.02 0.24
ENST00000553569 retained_intron 0 7 0.14 2.68 7 0.05 0.66 7 0.23 0.85 retained_intron 0
ENST00000545686 nonsense_mediated_decay 897 8 0.13 2.48 5 0.10 1.36
ENST00000553989 protein_coding 443 9 0.10 1.99 12 0.01 0.16 5 1.33 4.86 protein_coding 443 4.91
ENST00000557782 nonsense_mediated_decay 156 10 0.08 1.62 14 0.01 0.09
ENST00000554976 nonsense_mediated_decay 576 11 0.08 1.49 6 0.05 0.70
ENST00000555178 nonsense_mediated_decay 780 12 0.07 1.40 13 0.01 0.10
ENST00000393452 protein_coding 1770 13 0.06 1.13 3 0.14 1.92
ENST00000556498 protein_coding 485 14 0.05 0.95 8 0.17 0.61 protein_coding 485 0.61
ENST00000555565 processed_transcript 0 15 0.03 0.63 15 0.00 0.07 10 0.03 0.12 processed_transcript 0
ENST00000553617 protein_coding 659 16 0.02 0.46 16 0.00 0.01
ENST00000553527 protein_coding 438 17 0.02 0.38 8 0.05 0.66 6 0.47 1.70 protein_coding 438 1.72



GSE  ENSG00000042088_TDP1



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