CPG ID : 14_0450_00 Gene Name : tyrosyl-DNA phosphodiesterase 1
NCBI Gene ID : 55775 NCBI RefSeq : NM_018319 NCBI Protein: NP_060789
MANE Gene ID : ENSG00000042088 MANE Select ID : ENST00000335725 MANE Protein ID : ENSP00000337353
Chromosome : NC_000014.9 Start : 89955927 End : 90044764
Strand : + MANE Plus Clinical :
GSE All Transcripts GTEx v9 GTEx v8
Rank TPM Exp
Tx%
Ref
Tx
Tau Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS MANE
Select
Transcript ID Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type
(GENCODE v26)
CDS
length
2 10.78 39.30 0.902 protein_coding 1827 39.69 P:1 M ENST00000335725 1 6.12 85.04 1 2.37 46.13 protein_coding 1827
1 11.45 41.77 0.613 protein_coding 1827 42.18 P:1 ENST00000393454 2 0.46 6.39 2 1.15 22.33 protein_coding 1827
3 1.45 5.29 0.771 protein_coding 839 5.35 ENST00000554180 9 0.05 0.64 3 0.27 5.23 protein_coding 839
4 1.37 4.98 0.833 protein_coding 455 5.03 ENST00000556867 10 0.04 0.58 4 0.25 4.80 protein_coding 455
9 0.14 0.51 0.968 protein_coding 1737 0.52 ENST00000555880 4 0.10 1.37 5 0.19 3.60 protein_coding 1737
ENST00000556063 11 0.02 0.24 6 0.14 2.70 protein_coding 844
7 0.23 0.85 0.793 retained_intron 0 ENST00000553569 7 0.05 0.66 7 0.14 2.68 retained_intron 0
ENST00000545686 5 0.10 1.36 8 0.13 2.48 nonsense_mediated_decay 897
5 1.33 4.86 0.862 protein_coding 443 4.91 ENST00000553989 12 0.01 0.16 9 0.10 1.99 protein_coding 443
ENST00000557782 14 0.01 0.09 10 0.08 1.62 nonsense_mediated_decay 156
ENST00000554976 6 0.05 0.70 11 0.08 1.49 nonsense_mediated_decay 576
ENST00000555178 13 0.01 0.10 12 0.07 1.40 nonsense_mediated_decay 780
ENST00000393452 3 0.14 1.92 13 0.06 1.13 protein_coding 1770
8 0.17 0.61 0.977 protein_coding 485 0.61 ENST00000556498 14 0.05 0.95 protein_coding 485
10 0.03 0.12 1.000 processed_transcript 0 ENST00000555565 15 0.00 0.07 15 0.03 0.63 processed_transcript 0
ENST00000553617 16 0.00 0.01 16 0.02 0.46 protein_coding 659
6 0.47 1.70 0.914 protein_coding 438 1.72 ENST00000553527 8 0.05 0.66 17 0.02 0.38 protein_coding 438



GSE  ENSG00000042088_TDP1



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