CPG ID : 17_0285_00 Gene Name : sterol regulatory element binding transcription factor 1
NCBI Gene ID : 6720 NCBI RefSeq : NM_004176 NCBI Protein: NP_004167
MANE Gene ID : ENSG00000072310 MANE Select ID : ENST00000261646 MANE Protein ID : ENSP00000261646
Chromosome : NC_000017.11 Start : 17811334 End : 17836986
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000261646 protein_coding 3444 2 12.25 15.62 2 0.59 34.34 2 76.09 36.29 protein_coding 3444 42.29 P:2
ENST00000395756 nonsense_mediated_decay 340 1 12.34 15.75 10 0.00 0.25
ENST00000395757 protein_coding 2682 3 8.95 11.42
ENST00000584760 retained_intron 0 4 7.01 8.95 14 0.00 0.06 6 2.03 0.97 retained_intron 0
ENST00000476994 retained_intron 0 5 4.36 5.56 3 14.43 6.88 retained_intron 0
ENST00000355815 protein_coding 3534 6 3.89 4.97 3 0.21 12.37 1 102.01 48.65 protein_coding 3534 56.69 A:2
ENST00000423161 protein_coding 976 7 3.87 4.94 8 0.01 0.74 10 0.77 0.37 protein_coding 976 0.43
ENST00000395751 nonsense_mediated_decay 651 8 3.52 4.49 5 0.08 4.90 5 2.86 1.36 retained_intron 0
ENST00000478616 protein_coding 492 9 3.07 3.92 7 0.03 1.67 9 0.87 0.41 protein_coding 492 0.48
ENST00000581707 retained_intron 0 10 3.00 3.83 9 0.01 0.59 17 0.03 0.02 retained_intron 0
ENST00000471445 retained_intron 0 11 2.81 3.58 12 0.00 0.24 13 0.63 0.30 retained_intron 0
ENST00000583080 retained_intron 0 12 2.34 2.99 11 0.00 0.25
ENST00000578469 nonsense_mediated_decay 95 13 2.19 2.79 1 0.60 34.85
ENST00000469356 retained_intron 0 14 1.93 2.47 6 0.05 3.11 15 0.07 0.03 retained_intron 0
ENST00000580540 retained_intron 0 15 1.73 2.21 8 0.90 0.43 retained_intron 0
ENST00000485080 nonsense_mediated_decay 333 16 1.59 2.02 4 0.11 6.51
ENST00000487401 retained_intron 0 17 1.03 1.32 13 0.00 0.13 7 1.47 0.70 retained_intron 0
ENST00000470247 retained_intron 0 18 0.89 1.14 12 0.70 0.33 retained_intron 0
ENST00000583732 processed_transcript 0 19 0.52 0.67
ENST00000447641 retained_intron 0 20 0.41 0.52 16 0.03 0.02 retained_intron 0
ENST00000577897 protein_coding 198 21 0.35 0.45
ENST00000486311 protein_coding 473 22 0.21 0.27 14 0.20 0.10 protein_coding 473 0.11
ENST00000490796 retained_intron 0 23 0.10 0.13 11 0.70 0.34 retained_intron 0

GSE GTEx V34
MANE
Match
No Match
Transcript ID
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000662439 4 5.88 2.80 retained_intron 0




GSE  ENSG00000072310_SREBF1



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