| CPG ID : 19_0050_00 | Gene Name : cold inducible RNA binding protein | |
|---|---|---|
| NCBI Gene ID : 1153 | NCBI RefSeq : NM_001300829 | NCBI Protein: NP_001287758 |
|---|---|---|
| MANE Gene ID : ENSG00000099622 | MANE Select ID : ENST00000587896 | MANE Protein ID : ENSP00000466025 |
| Chromosome : NC_000019.10 | Start : 1269332 | End : 1274810 |
| Strand : + | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000320936 | protein_coding | 519 | 1 | 140.44 | 31.91 | ☀ | 1 | 78.73 | 67.06 | ☀ | 1 | 2,676.80 | 61.12 | ☀ | protein_coding | 519 | 86.13 | P:3 | |
| ENST00000589686 | protein_coding | 446 | 2 | 94.91 | 21.56 | 5 | 90.36 | 2.06 | protein_coding | 446 | 2.91 | ||||||||
| ENST00000621399 | retained_intron | 0 | 3 | 38.19 | 8.68 | 3 | 574.86 | 13.13 | retained_intron | 0 | |||||||||
| ENST00000590347 | nonsense_mediated_decay | 408 | 4 | 26.29 | 5.97 | 14 | 0.18 | 0.16 | 25 | 0.85 | 0.02 | nonsense_mediated_decay | 408 | ||||||
| ENST00000586636 | nonsense_mediated_decay | 507 | 5 | 23.64 | 5.37 | 2 | 24.40 | 20.78 | 2 | 606.68 | 13.85 | nonsense_mediated_decay | 507 | ||||||
| ENST00000588917 | retained_intron | 0 | 6 | 17.32 | 3.94 | 8 | 0.88 | 0.75 | 9 | 33.06 | 0.75 | retained_intron | 0 | ||||||
| ENST00000587169 | nonsense_mediated_decay | 240 | 7 | 16.63 | 3.78 | 16 | 0.17 | 0.15 | 12 | 8.69 | 0.20 | nonsense_mediated_decay | 240 | ||||||
| ENST00000589710 | protein_coding | 894 | 8 | 14.70 | 3.34 | 6 | 1.68 | 1.43 | 10 | 26.17 | 0.60 | protein_coding | 894 | 0.84 | |||||
| ENST00000413636 | protein_coding | 792 | 9 | 13.85 | 3.15 | 32 | 0.01 | 0.01 | 33 | 0.10 | 0.00 | protein_coding | 792 | 0.00 | |||||
| ENST00000588230 | protein_coding | 894 | 10 | 12.06 | 2.74 | ||||||||||||||
| ENST00000593093 | retained_intron | 0 | 11 | 9.49 | 2.16 | 4 | 2.24 | 1.91 | 24 | 0.95 | 0.02 | retained_intron | 0 | ||||||
| ENST00000589235 | protein_coding | 507 | 12 | 7.40 | 1.68 | 5 | 1.74 | 1.48 | 7 | 42.68 | 0.97 | protein_coding | 507 | 1.37 | A:1 | ||||
| ENST00000586555 | retained_intron | 0 | 13 | 6.09 | 1.38 | 20 | 0.04 | 0.04 | 19 | 3.63 | 0.08 | retained_intron | 0 | ||||||
| ENST00000444172 | nonsense_mediated_decay | 177 | 14 | 3.27 | 0.74 | 17 | 0.12 | 0.11 | 21 | 1.56 | 0.04 | nonsense_mediated_decay | 177 | ||||||
| ENST00000585630 | protein_coding | 519 | 15 | 3.01 | 0.68 | 12 | 0.19 | 0.16 | 6 | 71.80 | 1.64 | protein_coding | 519 | 2.31 | P:3 | ||||
| ENST00000586773 | protein_coding | 507 | 16 | 1.74 | 0.40 | 10 | 0.57 | 0.49 | 18 | 4.13 | 0.09 | protein_coding | 507 | 0.13 | A:1 | ||||
| ENST00000590704 | retained_intron | 0 | 17 | 1.61 | 0.36 | 23 | 0.02 | 0.02 | 22 | 1.29 | 0.03 | retained_intron | 0 | ||||||
| ENST00000585914 | nonsense_mediated_decay | 609 | 18 | 1.55 | 0.35 | 3 | 3.51 | 2.99 | 27 | 0.50 | 0.01 | nonsense_mediated_decay | 609 | ||||||
| ENST00000591659 | protein_coding | 521 | 19 | 1.31 | 0.30 | 38 | 0.00 | 0.00 | 8 | 37.44 | 0.85 | protein_coding | 521 | 1.20 | |||||
| ENST00000591097 | nonsense_mediated_decay | 183 | 20 | 1.14 | 0.26 | 18 | 0.11 | 0.10 | |||||||||||
| ENST00000589161 | retained_intron | 0 | 21 | 0.69 | 0.16 | 11 | 0.51 | 0.44 | 15 | 4.77 | 0.11 | retained_intron | 0 | ||||||
| ENST00000588090 | protein_coding | 519 | 22 | 0.57 | 0.13 | 15 | 0.18 | 0.15 | 14 | 4.77 | 0.11 | protein_coding | 519 | 0.15 | P:3 | ||||
| ENST00000586472 | protein_coding | 519 | 23 | 0.56 | 0.13 | 13 | 0.18 | 0.16 | 17 | 4.40 | 0.10 | protein_coding | 519 | 0.14 | P:3 | ||||
| ENST00000593283 | retained_intron | 0 | 24 | 0.56 | 0.13 | 27 | 0.01 | 0.01 | 23 | 0.98 | 0.02 | retained_intron | 0 | ||||||
| ENST00000592234 | nonsense_mediated_decay | 220 | 25 | 0.54 | 0.12 | 21 | 0.03 | 0.03 | |||||||||||
| ENST00000592467 | retained_intron | 0 | 26 | 0.42 | 0.10 | 9 | 0.63 | 0.54 | 13 | 7.80 | 0.18 | retained_intron | 0 | ||||||
| ENST00000592051 | protein_coding | 96 | 27 | 0.38 | 0.09 | 35 | 0.01 | 0.00 | 34 | 0.07 | 0.00 | protein_coding | 96 | 0.00 | |||||
| ENST00000588411 | protein_coding | 315 | 28 | 0.30 | 0.07 | 22 | 0.03 | 0.03 | |||||||||||
| ENST00000586548 | protein_coding | 479 | 29 | 0.26 | 0.06 | 28 | 0.01 | 0.01 | 32 | 0.11 | 0.00 | protein_coding | 479 | 0.00 | |||||
| ENST00000628979 | protein_coding | 894 | 30 | 0.24 | 0.06 | 29 | 0.01 | 0.01 | |||||||||||
| ENST00000592412 | nonsense_mediated_decay | 240 | 31 | 0.19 | 0.04 | 37 | 0.00 | 0.00 | 28 | 0.49 | 0.01 | nonsense_mediated_decay | 240 | ||||||
| ENST00000589266 | protein_coding | 242 | 32 | 0.18 | 0.04 | 33 | 0.01 | 0.01 | |||||||||||
| ENST00000592815 | protein_coding | 115 | 33 | 0.17 | 0.04 | 36 | 0.00 | 0.00 | |||||||||||
| ENST00000590171 | nonsense_mediated_decay | 183 | 34 | 0.09 | 0.02 | 31 | 0.23 | 0.01 | nonsense_mediated_decay | 183 | |||||||||
| ENST00000585913 | nonsense_mediated_decay | 507 | 35 | 0.07 | 0.02 | 19 | 0.09 | 0.08 | |||||||||||
| ENST00000590188 | processed_transcript | 0 | 36 | 0.05 | 0.01 | 34 | 0.01 | 0.01 | 29 | 0.34 | 0.01 | processed_transcript | 0 | ||||||
| ENST00000588344 | protein_coding | 270 | 37 | 0.04 | 0.01 | 25 | 0.01 | 0.01 | |||||||||||
| ENST00000591622 | retained_intron | 0 | 38 | 0.04 | 0.01 | 35 | 0.07 | 0.00 | retained_intron | 0 | |||||||||
| ENST00000591935 | protein_coding | 507 | 39 | 0.04 | 0.01 | ||||||||||||||
| ENST00000591055 | nonsense_mediated_decay | 408 | 40 | 0.04 | 0.01 | 24 | 0.02 | 0.02 | 26 | 0.76 | 0.02 | nonsense_mediated_decay | 408 | ||||||
| ENST00000593128 | retained_intron | 0 | 41 | 0.02 | 0.01 | 31 | 0.01 | 0.01 | 20 | 3.56 | 0.08 | retained_intron | 0 | ||||||
| ENST00000588030 | protein_coding | 519 | 42 | 0.02 | 0.00 | 30 | 0.01 | 0.01 | 30 | 0.29 | 0.01 | protein_coding | 519 | 0.01 | P:3 | ||||
| ENST00000591376 | nonsense_mediated_decay | 240 | 43 | 0.01 | 0.00 | 7 | 1.03 | 0.88 | 11 | 16.02 | 0.37 | nonsense_mediated_decay | 240 | ||||||
| ENST00000587323 | protein_coding | 894 | 44 | 0.00 | 0.00 | ||||||||||||||
| ☀ | ENST00000587896 | protein_coding | 894 | 45 | 0.00 | 0.00 | 4 | 148.66 | 3.39 | protein_coding | 894 | 4.78 | |||||||
| ENST00000593048 | nonsense_mediated_decay | 240 | 46 | 0.00 | 0.00 | 26 | 0.01 | 0.01 | 16 | 4.50 | 0.10 | nonsense_mediated_decay | 240 | ||||||