CPG ID : 14_0150_00 Gene Name : cochlin
NCBI Gene ID : 1690 NCBI RefSeq : NM_004086 NCBI Protein: NP_004077
MANE Gene ID : ENSG00000100473 MANE Select ID : ENST00000396618 MANE Protein ID : ENSP00000379862
Chromosome : NC_000014.9 Start : 30874559 End : 30890618
Strand : + MANE Plus Clinical :
GSE All Transcripts GTEx v9 GTEx v8
Rank TPM Exp
Tx%
Ref
Tx
Tau Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS MANE
Select
Transcript ID Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type
(GENCODE v26)
CDS
length
3 2.76 3.06 0.961 protein_coding 1848 3.07 ENST00000216361 1 1.12 55.27 1 3.45 45.35 protein_coding 1653
2 22.27 24.65 0.880 protein_coding 1653 24.73 P:1 M ENST00000396618 2 0.55 27.27 2 2.41 31.70 protein_coding 1653
ENST00000468826 4 0.03 1.57 3 1.13 14.82 protein_coding 1304
7 0.27 0.30 0.979 retained_intron 0 ENST00000553833 5 0.02 1.23 4 0.23 3.08 retained_intron 0
ENST00000555117 7 0.01 0.51 5 0.18 2.42 retained_intron 0
9 0.03 0.04 1.000 nonsense_mediated_decay 168 ENST00000557065 8 0.01 0.27 6 0.07 0.89 nonsense_mediated_decay 168
6 0.47 0.52 0.995 protein_coding 1317 0.52 ENST00000460581 6 0.02 1.07 7 0.05 0.71 protein_coding 1317
5 1.18 1.30 0.927 protein_coding 1485 1.31 ENST00000475087 3 0.26 12.82 8 0.04 0.54 protein_coding 1485
ENST00000553772 9 0.02 0.32 nonsense_mediated_decay 243
8 0.07 0.07 1.000 protein_coding 581 0.07 ENST00000556908 10 0.01 0.12 protein_coding 581
ENST00000555881 11 0.00 0.05 protein_coding 606

GSE
MANE
Select
No Match
Transcript ID
Rank TPM Exp
Tx%
Ref
Tx
Tau Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS
ENST00000644874 1 61.62 68.20 #007bff; 0.968 protein_coding 1653 68.43 P:1
ENST00000643575 4 1.68 1.86 0.929 protein_coding 1653 1.87 P:1




GSE  ENSG00000100473_COCH



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