CPG ID : 14_0150_00 Gene Name : cochlin
NCBI Gene ID : 1690 NCBI RefSeq : NM_004086 NCBI Protein: NP_004077
MANE Gene ID : ENSG00000100473 MANE Select ID : ENST00000396618 MANE Protein ID : ENSP00000379862
Chromosome : NC_000014.9 Start : 30874559 End : 30890618
Strand : + MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000216361 protein_coding 1653 1 3.45 45.35 1 1.12 55.27 3 2.76 3.06 protein_coding 1848 3.07
ENST00000396618 protein_coding 1653 2 2.41 31.70 2 0.55 27.27 2 22.27 24.65 protein_coding 1653 24.73 P:1
ENST00000468826 protein_coding 1304 3 1.13 14.82 4 0.03 1.57
ENST00000553833 retained_intron 0 4 0.23 3.08 5 0.02 1.23 7 0.27 0.30 retained_intron 0
ENST00000555117 retained_intron 0 5 0.18 2.42 7 0.01 0.51
ENST00000557065 nonsense_mediated_decay 168 6 0.07 0.89 8 0.01 0.27 9 0.03 0.04 nonsense_mediated_decay 168
ENST00000460581 protein_coding 1317 7 0.05 0.71 6 0.02 1.07 6 0.47 0.52 protein_coding 1317 0.52
ENST00000475087 protein_coding 1485 8 0.04 0.54 3 0.26 12.82 5 1.18 1.30 protein_coding 1485 1.31
ENST00000553772 nonsense_mediated_decay 243 9 0.02 0.32
ENST00000556908 protein_coding 581 10 0.01 0.12 8 0.07 0.07 protein_coding 581 0.07
ENST00000555881 protein_coding 606 11 0.00 0.05

GSE GTEx V34
MANE
Match
No Match
Transcript ID
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000644874 1 61.62 68.20 protein_coding 1653 68.43 P:1
ENST00000643575 4 1.68 1.86 protein_coding 1653 1.87 P:1




GSE  ENSG00000100473_COCH



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