CPG Cards

CPG ID : 20_0015_00	Gene Name : casein kinase 2 alpha 1

NCBI Gene ID : 1457	NCBI RefSeq : NM_177559	NCBI Protein: NP_808227
MANE Gene ID : ENSG00000101266	MANE Select ID : ENST00000217244	MANE Protein ID : ENSP00000217244
Chromosome : NC_000020.11	Start : 472498	End : 543790
Strand : -	MANE Plus Clinical :

TEx_MST : CSNK2A1

TREGT : CSNK2A1

		GENCODE V26		GTEx V8				GTEx V9				GSE				GENCODE V34
MANE Match	Transcript ID	Tx-Type	CDS length	Rank	TPM	Exp Tx%	Ref Tx	Rank	TPM	Exp Tx%	Ref Tx	Rank	TPM	Exp Tx%	Ref Tx	Tx-Type	CDS length	PC Tx%	APPRIS
	ENST00000349736	protein_coding	1176	1	17.84	71.59	☀	1	6.87	73.67	☀	5	11.67	5.00		protein_coding	768	6.51
	ENST00000400217	protein_coding	768	2	3.28	13.15		4	0.41	4.37		26	0.07	0.03		protein_coding	1176	0.04	P:1
☀	ENST00000217244	protein_coding	1176	3	1.57	6.31		3	0.66	7.04		4	18.64	7.98		protein_coding	1176	10.40	P:1
	ENST00000619801	protein_coding	357	4	0.80	3.23		5	0.18	1.94		27	0.07	0.03		protein_coding	357	0.04
	ENST00000609606	retained_intron	0	5	0.50	2.00		7	0.16	1.68		3	20.31	8.70		retained_intron	0
	ENST00000608490	retained_intron	0	6	0.34	1.38		6	0.16	1.70		7	7.90	3.38		retained_intron	0
	ENST00000400227	protein_coding	1158	7	0.26	1.04		2	0.75	8.08
	ENST00000460062	protein_coding	81	8	0.18	0.72		9	0.02	0.18
	ENST00000608066	protein_coding	239	9	0.12	0.49		8	0.12	1.23
	ENST00000609525	protein_coding	224	10	0.02	0.08		10	0.01	0.11

		GSE				GTEx V34
MANE Match	No Match Transcript ID	Rank	TPM	Exp Tx%	Ref Tx	Tx-Type	CDS length	PC Tx%	APPRIS
	ENST00000646561	1	106.12	45.45	☀	protein_coding	1176	59.20	P:1
	ENST00000642160	2	29.06	12.44		protein_coding	261	16.21
	ENST00000643660	6	8.07	3.45		protein_coding	1176	4.50	P:1
	ENST00000642673	8	6.36	2.72		retained_intron	0
	ENST00000645334	9	5.59	2.39		retained_intron	0
	ENST00000645768	10	4.09	1.75		retained_intron	0
	ENST00000644448	11	4.06	1.74		retained_intron	0
	ENST00000643641	12	2.98	1.28		retained_intron	0
	ENST00000643600	13	2.78	1.19		protein_coding	771	1.55
	ENST00000645840	14	1.47	0.63		nonsense_mediated_decay	267
	ENST00000645910	15	0.79	0.34		nonsense_mediated_decay	354
	ENST00000642689	16	0.75	0.32		protein_coding	1125	0.42
	ENST00000645623	17	0.71	0.30		protein_coding	1176	0.40	P:1
	ENST00000644003	18	0.48	0.20		protein_coding	768	0.27
	ENST00000643700	19	0.39	0.17		retained_intron	0
	ENST00000645234	20	0.32	0.14		protein_coding	1131	0.18
	ENST00000646305	21	0.19	0.08		protein_coding	1176	0.11	P:1
	ENST00000646443	22	0.17	0.07		retained_intron	0
	ENST00000643602	23	0.13	0.06		retained_intron	0
	ENST00000646814	24	0.12	0.05		protein_coding	1176	0.07	P:1
	ENST00000647026	25	0.11	0.05		protein_coding	1065	0.06
	ENST00000646908	28	0.07	0.03		protein_coding	224	0.04
	ENST00000645187	29	0.04	0.01		protein_coding	459	0.02
	ENST00000645260	30	0.03	0.01		protein_coding	1065	0.02

GSE ENSG00000101266_CSNK2A1

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