CPG Cards

CPG ID : 16_0094_00	Gene Name : TSC complex subunit 2

NCBI Gene ID : 7249	NCBI RefSeq : NM_000548	NCBI Protein: NP_000539
MANE Gene ID : ENSG00000103197	MANE Select ID : ENST00000219476	MANE Protein ID : ENSP00000219476
Chromosome : NC_000016.10	Start : 2047985	End : 2089491
Strand : +	MANE Plus Clinical :

TEx_MST : TSC2

TREGT : TSC2

GSE									All Transcripts		GTEx v9				GTEx v8
Rank	TPM	Exp Tx%	Ref Tx	Tau	Tx-Type (GENCODE v34)	CDS length	PC Tx%	APPRIS	MANE Select	Transcript ID	Rank	TPM	Exp Tx%	Ref Tx	Rank	TPM	Exp Tx%	Ref Tx	Tx-Type (GENCODE v26)	CDS length
										ENST00000569110					1	14.74	22.62	■	protein_coding	1606
2	48.46	17.14		0.575	retained_intron	0				ENST00000569930	5	0.21	7.94		2	12.60	19.33		retained_intron	0
										ENST00000497886	7	0.16	6.09		3	8.63	13.25		retained_intron	0
1	84.93	30.05	★	0.413	protein_coding	5223	50.62	A:2		ENST00000401874	11	0.04	1.49		4	4.76	7.30		protein_coding	5223
										ENST00000568366	19	0.00	0.14		5	4.33	6.64		processed_transcript	0
										ENST00000568454	4	0.21	8.05	☀	6	2.35	3.61		protein_coding	5256
13	4.26	1.51		0.761	protein_coding	5079	2.54			ENST00000382538	18	0.00	0.14		7	1.88	2.89		protein_coding	5079
26	0.37	0.13		0.908	retained_intron	0				ENST00000463601	14	0.02	0.85		8	1.84	2.83		retained_intron	0
38	0.03	0.01		1.000	retained_intron	0				ENST00000561695					9	1.81	2.78		retained_intron	0
										ENST00000439673	17	0.01	0.25		10	1.51	2.31		protein_coding	5115
25	0.37	0.13		0.845	retained_intron	0				ENST00000488675	2	0.31	11.98		11	1.42	2.18		retained_intron	0
										ENST00000439117	12	0.03	1.13		12	1.41	2.16		nonsense_mediated_decay	327
5	19.83	7.02		0.564	retained_intron	0				ENST00000461648	3	0.28	10.78		13	1.38	2.11		retained_intron	0
24	0.40	0.14		0.827	retained_intron	0				ENST00000563346					14	1.07	1.65		retained_intron	0
22	0.60	0.21		0.828	retained_intron	0				ENST00000463808	6	0.17	6.48		15	0.98	1.51		retained_intron	0
30	0.17	0.06		0.862	retained_intron	0				ENST00000568238	8	0.06	2.46		16	0.91	1.39		retained_intron	0
10	5.49	1.94		0.931	protein_coding	5424	3.27	A:2	M	ENST00000219476	10	0.06	2.13		17	0.76	1.16		protein_coding	5424
										ENST00000483020					18	0.64	0.98		nonsense_mediated_decay	108
37	0.03	0.01		1.000	retained_intron	0				ENST00000490108	16	0.01	0.25		19	0.64	0.98		retained_intron	0
14	3.39	1.20		0.596	retained_intron	0				ENST00000568692	1	0.94	35.88		20	0.62	0.95		retained_intron	0
8	8.63	3.05		0.892	protein_coding	5355	5.14	P:3		ENST00000350773	13	0.03	0.98		21	0.34	0.53		protein_coding	5355
										ENST00000467949	15	0.02	0.68		22	0.26	0.39		protein_coding	590
										ENST00000562474	9	0.06	2.29		23	0.15	0.23		processed_transcript	0
										ENST00000432909					24	0.07	0.10		protein_coding	374
										ENST00000471143					25	0.05	0.08		nonsense_mediated_decay	97
										ENST00000568566					26	0.04	0.06		nonsense_mediated_decay	93

		GSE
MANE Select	No Match Transcript ID	Rank	TPM	Exp Tx%	Ref Tx	Tau	Tx-Type (GENCODE v34)	CDS length	PC Tx%	APPRIS
	ENST00000642797	3	26.18	9.26		0.734	protein_coding	5226	15.61	A:2
	ENST00000642936	4	23.91	8.46		0.690	protein_coding	5292	14.25	A:2
	ENST00000647042	6	13.55	4.79		0.675	retained_intron	0
	ENST00000642791	7	12.07	4.27		0.738	retained_intron	0
	ENST00000644043	9	8.37	2.96		0.837	protein_coding	5295	4.99	A:2
	ENST00000644335	11	4.53	1.60		0.779	protein_coding	5220	2.70	A:1
	ENST00000644222	12	4.52	1.60		0.719	retained_intron	0
	ENST00000644665	15	3.12	1.10		0.637	retained_intron	0
	ENST00000643745	16	1.67	0.59		0.888	nonsense_mediated_decay	1155
	ENST00000643088	17	1.33	0.47		0.825	protein_coding	5217	0.79	A:1
	ENST00000643426	18	1.18	0.42		0.890	retained_intron	0
	ENST00000646674	19	1.18	0.42		0.747	retained_intron	0
	ENST00000645552	20	1.14	0.40		0.742	retained_intron	0
	ENST00000643149	21	0.93	0.33		0.824	retained_intron	0
	ENST00000646557	23	0.43	0.15		0.810	retained_intron	0
	ENST00000647180	27	0.36	0.13		0.920	retained_intron	0
	ENST00000643533	28	0.33	0.12		0.862	retained_intron	0
	ENST00000643177	29	0.27	0.10		0.899	retained_intron	0
	ENST00000645192	31	0.17	0.06		0.862	retained_intron	0
	ENST00000642206	32	0.13	0.05		0.897	protein_coding	264	0.08
	ENST00000645024	33	0.11	0.04		0.940	retained_intron	0
	ENST00000642812	34	0.07	0.03		0.971	retained_intron	0
	ENST00000644278	35	0.07	0.02		0.966	retained_intron	0
	ENST00000646464	36	0.07	0.02		0.966	nonsense_mediated_decay	198

GSE ENSG00000103197_TSC2

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