CPG ID : 06_0605_00 Gene Name : collagen type IX alpha 1 chain
NCBI Gene ID : 1297 NCBI RefSeq : NM_001851 NCBI Protein: NP_001842
MANE Gene ID : ENSG00000112280 MANE Select ID : ENST00000357250 MANE Protein ID : ENSP00000349790
Chromosome : NC_000006.12 Start : 70216126 End : 70303084
Strand : - MANE Plus Clinical :
GSE 192955 All Transcripts GTEx v9 GTEx v8
Rank Exp Exp
Tx%
Ref
Tx
Tau index Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS MANE
Select
Transcript ID Rank Exp Exp
Tx%
Ref
Tx
Rank Exp Exp
Tx%
Ref
Tx
Tx-Type
(GENCODE v26)
CDS
length
1 57.36 70.56 0.817 protein_coding 2037 73.01 ENST00000320755 1 0.44 88.45 1 2.22 80.24 protein_coding 2037
5 0.24 0.30 0.912 retained_intron 0 ENST00000493682 3 0.01 1.60 2 0.21 7.49 retained_intron 0
ENST00000370496 4 0.00 0.75 3 0.11 3.90 protein_coding 987
ENST00000489611 4 0.06 2.14 processed_transcript 0
ENST00000489861 5 0.05 1.88 retained_intron 0
2 21.20 26.08 0.975 protein_coding 2766 26.99 P:1 M ENST00000357250 2 0.05 9.20 6 0.05 1.81 protein_coding 2766
ENST00000447041 7 0.03 1.04 processed_transcript 0
4 1.11 1.37 0.930 processed_transcript 0 ENST00000360859 8 0.02 0.70 processed_transcript 0
7 0.06 0.07 0.994 processed_transcript 0 ENST00000486080 9 0.02 0.62 processed_transcript 0
6 0.07 0.08 1.000 retained_intron 0 ENST00000470652 10 0.00 0.18 retained_intron 0

GSE 192955
MANE
Select
No Match
Transcript ID
Rank Exp Exp
Tx%
Ref
Tx
Tau index Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS
ENST00000644493 3 1.26 1.54 0.837 nonsense_mediated_decay 339



GSE  ENSG00000112280_COL9A1



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