| CPG ID : 06_0757_00 | Gene Name : laminin subunit alpha 4 | |
|---|---|---|
| NCBI Gene ID : 3910 | NCBI RefSeq : NM_001105206 | NCBI Protein: NP_001098676 |
|---|---|---|
| MANE Gene ID : ENSG00000112769 | MANE Select ID : ENST00000230538 | MANE Protein ID : ENSP00000230538 |
| Chromosome : NC_000006.12 | Start : 112107931 | End : 112254567 |
| Strand : - | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000389463 | protein_coding | 5451 | 1 | 15.70 | 37.51 | ☀ | 7 | 0.33 | 1.77 | 1 | 220.37 | 37.70 | ☀ | protein_coding | 5451 | 37.83 | P:4 | ||
| ENST00000453937 | protein_coding | 363 | 2 | 8.22 | 19.65 | 2 | 3.84 | 20.73 | 5 | 23.57 | 4.03 | protein_coding | 363 | 4.05 | |||||
| ☀ | ENST00000230538 | protein_coding | 5472 | 3 | 6.64 | 15.87 | 3 | 1.83 | 9.91 | 3 | 127.87 | 21.88 | protein_coding | 5472 | 21.95 | A:1 | |||
| ENST00000455073 | protein_coding | 361 | 4 | 2.31 | 5.51 | 9 | 0.16 | 0.87 | 8 | 3.00 | 0.51 | protein_coding | 361 | 0.51 | |||||
| ENST00000521693 | retained_intron | 0 | 5 | 1.71 | 4.08 | 16 | 0.01 | 0.05 | 11 | 0.39 | 0.07 | retained_intron | 0 | ||||||
| ENST00000368638 | protein_coding | 363 | 6 | 1.22 | 2.91 | 1 | 9.06 | 48.95 | ☀ | 4 | 51.40 | 8.79 | protein_coding | 363 | 8.82 | ||||
| ENST00000518842 | retained_intron | 0 | 7 | 1.19 | 2.83 | 11 | 0.10 | 0.57 | 10 | 0.53 | 0.09 | retained_intron | 0 | ||||||
| ENST00000522006 | protein_coding | 5451 | 8 | 1.04 | 2.48 | 5 | 1.01 | 5.46 | 2 | 143.52 | 24.56 | protein_coding | 5451 | 24.64 | P:4 | ||||
| ENST00000604740 | retained_intron | 0 | 9 | 0.93 | 2.22 | 13 | 0.05 | 0.25 | 12 | 0.39 | 0.07 | retained_intron | 0 | ||||||
| ENST00000521398 | protein_coding | 995 | 10 | 0.38 | 0.92 | 14 | 0.03 | 0.14 | 6 | 7.09 | 1.21 | protein_coding | 995 | 1.22 | |||||
| ENST00000519245 | retained_intron | 0 | 11 | 0.38 | 0.90 | 12 | 0.08 | 0.42 | 13 | 0.33 | 0.06 | retained_intron | 0 | ||||||
| ENST00000243219 | protein_coding | 263 | 12 | 0.36 | 0.86 | 18 | 0.01 | 0.03 | |||||||||||
| ENST00000521732 | protein_coding | 562 | 13 | 0.32 | 0.75 | 10 | 0.15 | 0.82 | 16 | 0.13 | 0.02 | protein_coding | 562 | 0.02 | |||||
| ENST00000424408 | protein_coding | 5451 | 14 | 0.31 | 0.74 | 4 | 1.02 | 5.52 | 7 | 4.40 | 0.75 | protein_coding | 5451 | 0.76 | P:4 | ||||
| ENST00000521187 | retained_intron | 0 | 15 | 0.25 | 0.61 | 6 | 0.58 | 3.15 | 14 | 0.23 | 0.04 | retained_intron | 0 | ||||||
| ENST00000368640 | protein_coding | 536 | 16 | 0.25 | 0.61 | 17 | 0.01 | 0.05 | 18 | 0.03 | 0.01 | protein_coding | 536 | 0.01 | |||||
| ENST00000519932 | protein_coding | 320 | 17 | 0.24 | 0.58 | 19 | 0.01 | 0.03 | 15 | 0.18 | 0.03 | protein_coding | 320 | 0.03 | |||||
| ENST00000521690 | protein_coding | 244 | 18 | 0.15 | 0.36 | 20 | 0.01 | 0.03 | 17 | 0.07 | 0.01 | protein_coding | 244 | 0.01 | |||||
| ENST00000431543 | protein_coding | 390 | 19 | 0.13 | 0.30 | 8 | 0.22 | 1.18 | 9 | 0.94 | 0.16 | protein_coding | 390 | 0.16 | |||||
| ENST00000523765 | nonsense_mediated_decay | 566 | 20 | 0.12 | 0.28 | 15 | 0.01 | 0.05 | |||||||||||
| ENST00000423735 | processed_transcript | 0 | 21 | 0.01 | 0.02 | 22 | 0.00 | 0.01 | |||||||||||
| ENST00000524032 | processed_transcript | 0 | 22 | 0.01 | 0.02 | 21 | 0.00 | 0.02 | |||||||||||