CPG ID : 17_0116_00 Gene Name : RPA interacting protein
NCBI Gene ID : 84268 NCBI RefSeq : NM_001033002 NCBI Protein: NP_001028174
MANE Gene ID : ENSG00000129197 MANE Select ID : ENST00000381209 MANE Protein ID : ENSP00000370606
Chromosome : NC_000017.11 Start : 5420182 End : 5432877
Strand : + MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000381209 protein_coding 660 1 5.31 19.52 3 24.12 18.01 3 117.43 18.13 protein_coding 660 27.94 P:1
ENST00000575112 nonsense_mediated_decay 324 2 4.17 15.30 7 2.50 1.87 15 0.78 0.12 nonsense_mediated_decay 324
ENST00000536255 protein_coding 321 3 4.05 14.87 2 25.78 19.25 1 218.80 33.78 protein_coding 321 52.05
ENST00000573126 retained_intron 0 4 3.29 12.09 11 1.18 0.88 6 22.21 3.43 retained_intron 0
ENST00000572174 retained_intron 0 5 2.41 8.85 6 2.61 1.95 2 126.06 19.46 retained_intron 0
ENST00000381208 protein_coding 519 6 1.43 5.25 4 16.88 12.61 5 36.18 5.59 protein_coding 519 8.61
ENST00000570883 retained_intron 0 7 1.32 4.83 16 0.43 0.07 retained_intron 0
ENST00000327154 protein_coding 447 8 1.00 3.67 13 0.18 0.13 4 46.12 7.12 protein_coding 447 10.97
ENST00000405578 protein_coding 696 9 0.93 3.40 15 0.01 0.00 14 1.58 0.24 protein_coding 696 0.38
ENST00000575711 retained_intron 0 10 0.70 2.58 14 0.10 0.07 10 13.37 2.06 retained_intron 0
ENST00000571613 retained_intron 0 11 0.69 2.52 8 1.84 1.37 9 13.85 2.14 retained_intron 0
ENST00000573577 nonsense_mediated_decay 324 12 0.67 2.44 1 51.06 38.13 8 15.51 2.39 nonsense_mediated_decay 324
ENST00000539417 nonsense_mediated_decay 438 13 0.41 1.50 10 1.54 1.15 11 8.07 1.25 nonsense_mediated_decay 438
ENST00000574003 protein_coding 321 14 0.25 0.93 17 0.23 0.04 protein_coding 321 0.06
ENST00000571043 retained_intron 0 15 0.25 0.90 12 0.73 0.54 12 4.11 0.63 retained_intron 0
ENST00000571558 nonsense_mediated_decay 324 16 0.22 0.80 5 3.80 2.84 7 19.09 2.95 nonsense_mediated_decay 324
ENST00000575599 nonsense_mediated_decay 321 17 0.15 0.53 9 1.59 1.19 13 3.85 0.59 nonsense_mediated_decay 321



GSE  ENSG00000129197_RPAIN



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