| CPG ID : 17_0116_00 | Gene Name : RPA interacting protein | |
|---|---|---|
| NCBI Gene ID : 84268 | NCBI RefSeq : NM_001033002 | NCBI Protein: NP_001028174 |
|---|---|---|
| MANE Gene ID : ENSG00000129197 | MANE Select ID : ENST00000381209 | MANE Protein ID : ENSP00000370606 |
| Chromosome : NC_000017.11 | Start : 5420182 | End : 5432877 |
| Strand : + | MANE Plus Clinical : |
| GSE 192955 | All Transcripts | GTEx v9 | GTEx v8 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Rank | Exp | Exp Tx% |
Tx |
Tau index | Tx-Type |
CDS length |
PC Tx% |
APPRIS | MANE Select |
Rank | Exp | Exp Tx% |
Tx |
Rank | Exp | Exp Tx% |
Tx |
Tx-Type |
CDS length |
|
| 3 | 117.43 | 18.13 | 0.632 | protein_coding | 660 | 27.94 | P:1 | M | ENST00000381209 | 3 | 24.12 | 18.01 | 1 | 5.31 | 19.52 | ■ | protein_coding | 660 | ||
| 15 | 0.78 | 0.12 | 0.768 | nonsense_mediated_decay | 324 | ENST00000575112 | 7 | 2.50 | 1.87 | 2 | 4.17 | 15.30 | nonsense_mediated_decay | 324 | ||||||
| 1 | 218.80 | 33.78 | ★ | 0.674 | protein_coding | 321 | 52.05 | ENST00000536255 | 2 | 25.78 | 19.25 | ☀ | 3 | 4.05 | 14.87 | protein_coding | 321 | |||
| 6 | 22.21 | 3.43 | 0.548 | retained_intron | 0 | ENST00000573126 | 11 | 1.18 | 0.88 | 4 | 3.29 | 12.09 | retained_intron | 0 | ||||||
| 2 | 126.06 | 19.46 | 0.562 | retained_intron | 0 | ENST00000572174 | 6 | 2.61 | 1.95 | 5 | 2.41 | 8.85 | retained_intron | 0 | ||||||
| 5 | 36.18 | 5.59 | 0.741 | protein_coding | 519 | 8.61 | ENST00000381208 | 4 | 16.88 | 12.61 | 6 | 1.43 | 5.25 | protein_coding | 519 | |||||
| 16 | 0.43 | 0.07 | 0.885 | retained_intron | 0 | ENST00000570883 | 7 | 1.32 | 4.83 | retained_intron | 0 | |||||||||
| 4 | 46.12 | 7.12 | 0.623 | protein_coding | 447 | 10.97 | ENST00000327154 | 13 | 0.18 | 0.13 | 8 | 1.00 | 3.67 | protein_coding | 447 | |||||
| 14 | 1.58 | 0.24 | 0.710 | protein_coding | 696 | 0.38 | ENST00000405578 | 15 | 0.01 | 0.00 | 9 | 0.93 | 3.40 | protein_coding | 696 | |||||
| 10 | 13.37 | 2.06 | 0.602 | retained_intron | 0 | ENST00000575711 | 14 | 0.10 | 0.07 | 10 | 0.70 | 2.58 | retained_intron | 0 | ||||||
| 9 | 13.85 | 2.14 | 0.721 | retained_intron | 0 | ENST00000571613 | 8 | 1.84 | 1.37 | 11 | 0.69 | 2.52 | retained_intron | 0 | ||||||
| 8 | 15.51 | 2.39 | 0.611 | nonsense_mediated_decay | 324 | ENST00000573577 | 1 | 51.06 | 38.13 | 12 | 0.67 | 2.44 | nonsense_mediated_decay | 324 | ||||||
| 11 | 8.07 | 1.25 | 0.771 | nonsense_mediated_decay | 438 | ENST00000539417 | 10 | 1.54 | 1.15 | 13 | 0.41 | 1.50 | nonsense_mediated_decay | 438 | ||||||
| 17 | 0.23 | 0.04 | 0.793 | protein_coding | 321 | 0.06 | ENST00000574003 | 14 | 0.25 | 0.93 | protein_coding | 321 | ||||||||
| 12 | 4.11 | 0.63 | 0.751 | retained_intron | 0 | ENST00000571043 | 12 | 0.73 | 0.54 | 15 | 0.25 | 0.90 | retained_intron | 0 | ||||||
| 7 | 19.09 | 2.95 | 0.649 | nonsense_mediated_decay | 324 | ENST00000571558 | 5 | 3.80 | 2.84 | 16 | 0.22 | 0.80 | nonsense_mediated_decay | 324 | ||||||
| 13 | 3.85 | 0.59 | 0.898 | nonsense_mediated_decay | 321 | ENST00000575599 | 9 | 1.59 | 1.19 | 17 | 0.15 | 0.53 | nonsense_mediated_decay | 321 | ||||||