| CPG ID : 17_0116_00 | Gene Name : RPA interacting protein | |
|---|---|---|
| NCBI Gene ID : 84268 | NCBI RefSeq : NM_001033002 | NCBI Protein: NP_001028174 |
|---|---|---|
| MANE Gene ID : ENSG00000129197 | MANE Select ID : ENST00000381209 | MANE Protein ID : ENSP00000370606 |
| Chromosome : NC_000017.11 | Start : 5420182 | End : 5432877 |
| Strand : + | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ☀ | ENST00000381209 | protein_coding | 660 | 1 | 5.31 | 19.52 | ☀ | 3 | 24.12 | 18.01 | 3 | 117.43 | 18.13 | protein_coding | 660 | 27.94 | P:1 | ||
| ENST00000575112 | nonsense_mediated_decay | 324 | 2 | 4.17 | 15.30 | 7 | 2.50 | 1.87 | 15 | 0.78 | 0.12 | nonsense_mediated_decay | 324 | ||||||
| ENST00000536255 | protein_coding | 321 | 3 | 4.05 | 14.87 | 2 | 25.78 | 19.25 | ☀ | 1 | 218.80 | 33.78 | ☀ | protein_coding | 321 | 52.05 | |||
| ENST00000573126 | retained_intron | 0 | 4 | 3.29 | 12.09 | 11 | 1.18 | 0.88 | 6 | 22.21 | 3.43 | retained_intron | 0 | ||||||
| ENST00000572174 | retained_intron | 0 | 5 | 2.41 | 8.85 | 6 | 2.61 | 1.95 | 2 | 126.06 | 19.46 | retained_intron | 0 | ||||||
| ENST00000381208 | protein_coding | 519 | 6 | 1.43 | 5.25 | 4 | 16.88 | 12.61 | 5 | 36.18 | 5.59 | protein_coding | 519 | 8.61 | |||||
| ENST00000570883 | retained_intron | 0 | 7 | 1.32 | 4.83 | 16 | 0.43 | 0.07 | retained_intron | 0 | |||||||||
| ENST00000327154 | protein_coding | 447 | 8 | 1.00 | 3.67 | 13 | 0.18 | 0.13 | 4 | 46.12 | 7.12 | protein_coding | 447 | 10.97 | |||||
| ENST00000405578 | protein_coding | 696 | 9 | 0.93 | 3.40 | 15 | 0.01 | 0.00 | 14 | 1.58 | 0.24 | protein_coding | 696 | 0.38 | |||||
| ENST00000575711 | retained_intron | 0 | 10 | 0.70 | 2.58 | 14 | 0.10 | 0.07 | 10 | 13.37 | 2.06 | retained_intron | 0 | ||||||
| ENST00000571613 | retained_intron | 0 | 11 | 0.69 | 2.52 | 8 | 1.84 | 1.37 | 9 | 13.85 | 2.14 | retained_intron | 0 | ||||||
| ENST00000573577 | nonsense_mediated_decay | 324 | 12 | 0.67 | 2.44 | 1 | 51.06 | 38.13 | 8 | 15.51 | 2.39 | nonsense_mediated_decay | 324 | ||||||
| ENST00000539417 | nonsense_mediated_decay | 438 | 13 | 0.41 | 1.50 | 10 | 1.54 | 1.15 | 11 | 8.07 | 1.25 | nonsense_mediated_decay | 438 | ||||||
| ENST00000574003 | protein_coding | 321 | 14 | 0.25 | 0.93 | 17 | 0.23 | 0.04 | protein_coding | 321 | 0.06 | ||||||||
| ENST00000571043 | retained_intron | 0 | 15 | 0.25 | 0.90 | 12 | 0.73 | 0.54 | 12 | 4.11 | 0.63 | retained_intron | 0 | ||||||
| ENST00000571558 | nonsense_mediated_decay | 324 | 16 | 0.22 | 0.80 | 5 | 3.80 | 2.84 | 7 | 19.09 | 2.95 | nonsense_mediated_decay | 324 | ||||||
| ENST00000575599 | nonsense_mediated_decay | 321 | 17 | 0.15 | 0.53 | 9 | 1.59 | 1.19 | 13 | 3.85 | 0.59 | nonsense_mediated_decay | 321 | ||||||