| CPG ID : 20_0264_00 | Gene Name : RNA binding motif protein 39 | |
|---|---|---|
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ☀ | ENST00000253363 | protein_coding | 1593 | 1 | 20.65 | 9.60 | ☀ | 25 | 0.11 | 0.17 | 2 | 321.08 | 24.55 | protein_coding | 1593 | 47.08 | A:1 | ||
| ENST00000463004 | retained_intron | 0 | 2 | 18.80 | 8.74 | 3 | 7.58 | 12.09 | 3 | 119.56 | 9.14 | retained_intron | 0 | ||||||
| ENST00000444878 | nonsense_mediated_decay | 123 | 3 | 18.26 | 8.49 | 18 | 0.22 | 0.35 | 8 | 39.99 | 3.06 | nonsense_mediated_decay | 123 | ||||||
| ENST00000465158 | retained_intron | 0 | 4 | 17.76 | 8.26 | 1 | 24.16 | 38.54 | 7 | 46.60 | 3.56 | retained_intron | 0 | ||||||
| ENST00000496183 | retained_intron | 0 | 5 | 15.99 | 7.44 | 16 | 0.37 | 0.58 | 11 | 23.30 | 1.78 | retained_intron | 0 | ||||||
| ENST00000461283 | retained_intron | 0 | 6 | 14.90 | 6.93 | 32 | 0.04 | 0.07 | 23 | 3.60 | 0.27 | retained_intron | 0 | ||||||
| ENST00000490484 | nonsense_mediated_decay | 738 | 7 | 13.96 | 6.49 | 22 | 0.13 | 0.20 | 36 | 0.03 | 0.00 | nonsense_mediated_decay | 738 | ||||||
| ENST00000361162 | protein_coding | 1575 | 8 | 11.14 | 5.18 | 2 | 10.68 | 17.04 | ☀ | 1 | 339.62 | 25.96 | ☀ | protein_coding | 1575 | 49.80 | P:3 | ||
| ENST00000374038 | protein_coding | 695 | 9 | 10.11 | 4.70 | 33 | 0.03 | 0.05 | 15 | 6.52 | 0.50 | protein_coding | 695 | 0.96 | |||||
| ENST00000403542 | nonsense_mediated_decay | 123 | 10 | 9.82 | 4.57 | 4 | 3.21 | 5.12 | 5 | 104.82 | 8.01 | nonsense_mediated_decay | 123 | ||||||
| ENST00000482563 | retained_intron | 0 | 11 | 9.38 | 4.36 | 8 | 1.89 | 3.01 | 25 | 1.20 | 0.09 | retained_intron | 0 | ||||||
| ENST00000461849 | retained_intron | 0 | 12 | 7.60 | 3.53 | 10 | 1.18 | 1.89 | 4 | 114.79 | 8.78 | retained_intron | 0 | ||||||
| ENST00000471635 | retained_intron | 0 | 13 | 6.12 | 2.85 | 15 | 0.45 | 0.71 | 14 | 7.90 | 0.60 | retained_intron | 0 | ||||||
| ENST00000495293 | retained_intron | 0 | 14 | 4.65 | 2.16 | 17 | 0.27 | 0.44 | 6 | 56.33 | 4.31 | retained_intron | 0 | ||||||
| ENST00000492779 | retained_intron | 0 | 15 | 3.73 | 1.74 | 6 | 2.08 | 3.31 | 13 | 15.67 | 1.20 | retained_intron | 0 | ||||||
| ENST00000470563 | processed_transcript | 0 | 16 | 3.55 | 1.65 | 9 | 1.27 | 2.03 | 30 | 0.30 | 0.02 | processed_transcript | 0 | ||||||
| ENST00000412738 | nonsense_mediated_decay | 123 | 17 | 3.53 | 1.64 | 19 | 0.20 | 0.31 | 29 | 0.34 | 0.03 | nonsense_mediated_decay | 123 | ||||||
| ENST00000477334 | retained_intron | 0 | 18 | 3.38 | 1.57 | 31 | 0.05 | 0.09 | 9 | 27.97 | 2.14 | retained_intron | 0 | ||||||
| ENST00000455343 | nonsense_mediated_decay | 123 | 19 | 3.02 | 1.41 | 40 | 0.00 | 0.01 | |||||||||||
| ENST00000490354 | retained_intron | 0 | 20 | 2.77 | 1.29 | 20 | 0.20 | 0.31 | 10 | 24.20 | 1.85 | retained_intron | 0 | ||||||
| ENST00000528062 | protein_coding | 1527 | 21 | 2.35 | 1.09 | 14 | 0.56 | 0.90 | 16 | 6.52 | 0.50 | protein_coding | 1527 | 0.96 | |||||
| ENST00000453310 | nonsense_mediated_decay | 123 | 22 | 1.62 | 0.75 | 7 | 1.90 | 3.04 | 12 | 18.77 | 1.43 | nonsense_mediated_decay | 123 | ||||||
| ENST00000615771 | nonsense_mediated_decay | 490 | 23 | 1.56 | 0.73 | 30 | 0.06 | 0.09 | |||||||||||
| ENST00000475651 | retained_intron | 0 | 24 | 1.55 | 0.72 | 37 | 0.01 | 0.02 | 31 | 0.20 | 0.02 | retained_intron | 0 | ||||||
| ENST00000434927 | protein_coding | 581 | 25 | 1.38 | 0.64 | 38 | 0.01 | 0.02 | 26 | 0.67 | 0.05 | protein_coding | 581 | 0.10 | |||||
| ENST00000481037 | retained_intron | 0 | 26 | 1.30 | 0.60 | 34 | 0.03 | 0.05 | |||||||||||
| ENST00000487604 | processed_transcript | 0 | 27 | 1.17 | 0.54 | 39 | 0.01 | 0.01 | 24 | 1.23 | 0.09 | processed_transcript | 0 | ||||||
| ENST00000463098 | processed_transcript | 0 | 28 | 1.01 | 0.47 | 11 | 1.15 | 1.83 | 20 | 3.94 | 0.30 | processed_transcript | 0 | ||||||
| ENST00000468086 | retained_intron | 0 | 29 | 0.87 | 0.41 | 5 | 2.24 | 3.58 | 34 | 0.03 | 0.00 | retained_intron | 0 | ||||||
| ENST00000476806 | nonsense_mediated_decay | 180 | 30 | 0.61 | 0.28 | 24 | 0.12 | 0.19 | 35 | 0.03 | 0.00 | nonsense_mediated_decay | 180 | ||||||
| ENST00000639702 | retained_intron | 0 | 31 | 0.54 | 0.25 | 13 | 0.84 | 1.34 | |||||||||||
| ENST00000442447 | processed_transcript | 0 | 32 | 0.43 | 0.20 | 36 | 0.02 | 0.03 | 18 | 4.71 | 0.36 | processed_transcript | 0 | ||||||
| ENST00000429968 | nonsense_mediated_decay | 144 | 33 | 0.32 | 0.15 | 21 | 0.19 | 0.31 | 19 | 4.35 | 0.33 | nonsense_mediated_decay | 144 | ||||||
| ENST00000338163 | nonsense_mediated_decay | 1272 | 34 | 0.24 | 0.11 | 27 | 0.08 | 0.13 | 27 | 0.46 | 0.03 | nonsense_mediated_decay | 1272 | ||||||
| ENST00000448303 | protein_coding | 1008 | 35 | 0.20 | 0.09 | 43 | 0.00 | 0.00 | |||||||||||
| ENST00000416529 | nonsense_mediated_decay | 189 | 36 | 0.19 | 0.09 | 26 | 0.10 | 0.15 | 33 | 0.07 | 0.01 | nonsense_mediated_decay | 189 | ||||||
| ENST00000426951 | protein_coding | 260 | 37 | 0.16 | 0.07 | 12 | 0.97 | 1.55 | 21 | 3.83 | 0.29 | protein_coding | 260 | 0.56 | |||||
| ENST00000397370 | protein_coding | 288 | 38 | 0.14 | 0.06 | 22 | 3.77 | 0.29 | protein_coding | 288 | 0.55 | ||||||||
| ENST00000498280 | processed_transcript | 0 | 39 | 0.10 | 0.05 | 23 | 0.12 | 0.19 | |||||||||||
| ENST00000425184 | nonsense_mediated_decay | 72 | 40 | 0.09 | 0.04 | 41 | 0.00 | 0.00 | |||||||||||
| ENST00000416108 | nonsense_mediated_decay | 123 | 41 | 0.05 | 0.02 | 29 | 0.06 | 0.10 | |||||||||||
| ENST00000493853 | retained_intron | 0 | 42 | 0.01 | 0.01 | 28 | 0.07 | 0.12 | 32 | 0.13 | 0.01 | retained_intron | 0 | ||||||
| ENST00000449489 | nonsense_mediated_decay | 123 | 43 | 0.01 | 0.00 | 44 | 0.00 | 0.00 | |||||||||||
| ENST00000494274 | processed_transcript | 0 | 44 | 0.01 | 0.00 | 35 | 0.02 | 0.03 | 37 | 0.03 | 0.00 | processed_transcript | 0 | ||||||
| ENST00000433027 | nonsense_mediated_decay | 120 | 45 | 0.00 | 0.00 | 42 | 0.00 | 0.00 | |||||||||||
| GSE | GTEx V34 | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
No Match |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS |
| ENST00000656873 | 17 | 5.05 | 0.39 | nonsense_mediated_decay | 123 | ||||
| ENST00000665058 | 28 | 0.42 | 0.03 | processed_transcript | 0 | ||||