| CPG ID : 11_0655_00 | Gene Name : reticulon 3 | |
|---|---|---|
| NCBI Gene ID : 10313 | NCBI RefSeq : NM_001265589 | NCBI Protein: NP_001252518 |
|---|---|---|
| MANE Gene ID : ENSG00000133318 | MANE Select ID : ENST00000377819 | MANE Protein ID : ENSP00000367050 |
| Chromosome : NC_000011.10 | Start : 63681500 | End : 63759882 |
| Strand : + | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000537981 | protein_coding | 711 | 1 | 105.69 | 89.41 | ☀ | 1 | 36.09 | 87.46 | ☀ | 1 | 3,636.90 | 87.90 | ☀ | protein_coding | 711 | 89.24 | P:1 | |
| ENST00000356000 | protein_coding | 768 | 2 | 4.80 | 4.06 | 2 | 2.63 | 6.37 | 2 | 218.40 | 5.28 | protein_coding | 768 | 5.36 | |||||
| ENST00000341307 | protein_coding | 726 | 3 | 3.76 | 3.18 | 3 | 1.49 | 3.62 | 4 | 92.88 | 2.24 | protein_coding | 726 | 2.28 | |||||
| ☀ | ENST00000377819 | protein_coding | 3099 | 4 | 1.40 | 1.19 | 5 | 0.36 | 0.87 | 3 | 107.87 | 2.61 | protein_coding | 3099 | 2.65 | ||||
| ENST00000543123 | retained_intron | 0 | 5 | 1.02 | 0.86 | 4 | 0.37 | 0.90 | 5 | 54.77 | 1.32 | retained_intron | 0 | ||||||
| ENST00000540798 | protein_coding | 2763 | 6 | 0.36 | 0.31 | 9 | 0.02 | 0.06 | 8 | 3.87 | 0.09 | protein_coding | 2763 | 0.09 | |||||
| ENST00000339997 | protein_coding | 3042 | 7 | 0.31 | 0.26 | 8 | 0.04 | 0.11 | 6 | 8.81 | 0.21 | protein_coding | 3042 | 0.22 | |||||
| ENST00000354497 | protein_coding | 645 | 8 | 0.30 | 0.25 | 7 | 0.06 | 0.15 | 10 | 2.62 | 0.06 | protein_coding | 645 | 0.06 | |||||
| ENST00000538995 | processed_transcript | 0 | 9 | 0.21 | 0.18 | 6 | 0.16 | 0.38 | 11 | 2.10 | 0.05 | processed_transcript | 0 | ||||||
| ENST00000338850 | processed_transcript | 0 | 10 | 0.10 | 0.08 | 10 | 0.02 | 0.04 | 7 | 4.80 | 0.12 | processed_transcript | 0 | ||||||
| ENST00000542238 | protein_coding | 556 | 11 | 0.08 | 0.07 | 12 | 0.00 | 0.01 | 14 | 0.03 | 0.00 | protein_coding | 556 | 0.00 | |||||
| ENST00000536011 | nonsense_mediated_decay | 372 | 12 | 0.07 | 0.06 | 11 | 0.01 | 0.02 | 12 | 0.45 | 0.01 | nonsense_mediated_decay | 372 | ||||||
| ENST00000543552 | protein_coding | 392 | 13 | 0.07 | 0.06 | 13 | 0.00 | 0.00 | 13 | 0.13 | 0.00 | protein_coding | 392 | 0.00 | |||||
| ENST00000545432 | protein_coding | 408 | 14 | 0.04 | 0.03 | 9 | 3.72 | 0.09 | protein_coding | 408 | 0.09 | ||||||||