| CPG ID : 01_0411_00 | Gene Name : pumilio RNA binding family member 1 | |
|---|---|---|
| NCBI Gene ID : 9698 | NCBI RefSeq : NM_001020658 | NCBI Protein: NP_001018494 |
|---|---|---|
| MANE Gene ID : ENSG00000134644 | MANE Select ID : ENST00000426105 | MANE Protein ID : ENSP00000391723 |
| Chromosome : NC_000001.11 | Start : 30931506 | End : 31065717 |
| Strand : - | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000424085 | protein_coding | 2835 | 1 | 8.47 | 37.96 | ☀ | 3 | 0.24 | 15.23 | 9 | 2.11 | 1.20 | protein_coding | 2835 | 1.28 | ||||
| ENST00000373747 | protein_coding | 3570 | 2 | 6.56 | 29.39 | 11 | 0.03 | 2.17 | 1 | 54.60 | 31.02 | ☀ | protein_coding | 3570 | 33.25 | A:1 | |||
| ENST00000257075 | protein_coding | 3561 | 3 | 3.37 | 15.10 | 17 | 0.00 | 0.15 | 2 | 49.76 | 28.27 | protein_coding | 3561 | 30.30 | P:4 | ||||
| ENST00000440538 | protein_coding | 3489 | 4 | 0.70 | 3.15 | 1 | 0.44 | 28.61 | ☀ | 5 | 7.65 | 4.35 | protein_coding | 3489 | 4.66 | ||||
| ENST00000529846 | protein_coding | 683 | 5 | 0.62 | 2.78 | 19 | 0.00 | 0.08 | 15 | 0.03 | 0.02 | protein_coding | 683 | 0.02 | |||||
| ENST00000498627 | retained_intron | 0 | 6 | 0.49 | 2.21 | 12 | 0.02 | 1.11 | 10 | 0.97 | 0.55 | retained_intron | 0 | ||||||
| ENST00000490546 | processed_transcript | 0 | 7 | 0.36 | 1.60 | 10 | 0.04 | 2.31 | |||||||||||
| ENST00000525843 | protein_coding | 3376 | 8 | 0.27 | 1.19 | 2 | 0.25 | 16.29 | 8 | 2.17 | 1.23 | protein_coding | 3376 | 1.32 | |||||
| ENST00000498419 | protein_coding | 2701 | 9 | 0.21 | 0.93 | 4 | 0.20 | 13.06 | 7 | 2.92 | 1.66 | protein_coding | 2701 | 1.78 | |||||
| ENST00000530669 | nonsense_mediated_decay | 231 | 10 | 0.20 | 0.89 | 20 | 0.00 | 0.03 | |||||||||||
| ENST00000373742 | protein_coding | 3384 | 11 | 0.19 | 0.87 | 5 | 0.12 | 7.43 | 13 | 0.47 | 0.27 | protein_coding | 3384 | 0.29 | |||||
| ENST00000532678 | protein_coding | 793 | 12 | 0.18 | 0.81 | 18 | 0.00 | 0.12 | 14 | 0.10 | 0.06 | protein_coding | 793 | 0.06 | |||||
| ENST00000525948 | nonsense_mediated_decay | 285 | 13 | 0.13 | 0.60 | 14 | 0.00 | 0.25 | 12 | 0.61 | 0.35 | nonsense_mediated_decay | 285 | ||||||
| ENST00000525997 | protein_coding | 650 | 14 | 0.13 | 0.56 | ||||||||||||||
| ENST00000480602 | nonsense_mediated_decay | 375 | 15 | 0.11 | 0.48 | 13 | 0.01 | 0.45 | 11 | 0.76 | 0.43 | nonsense_mediated_decay | 375 | ||||||
| ENST00000524516 | retained_intron | 0 | 16 | 0.09 | 0.40 | 9 | 0.04 | 2.63 | 4 | 9.46 | 5.38 | retained_intron | 0 | ||||||
| ENST00000471894 | retained_intron | 0 | 17 | 0.09 | 0.39 | 8 | 0.04 | 2.68 | |||||||||||
| ENST00000527498 | nonsense_mediated_decay | 273 | 18 | 0.05 | 0.23 | ||||||||||||||
| ENST00000526128 | processed_transcript | 0 | 19 | 0.05 | 0.21 | 6 | 0.06 | 4.18 | |||||||||||
| ENST00000526215 | nonsense_mediated_decay | 285 | 20 | 0.03 | 0.11 | ||||||||||||||
| ENST00000373741 | protein_coding | 3675 | 21 | 0.02 | 0.11 | 7 | 0.04 | 2.83 | 6 | 4.19 | 2.38 | protein_coding | 3675 | 2.55 | |||||
| ENST00000531867 | protein_coding | 288 | 22 | 0.01 | 0.02 | 15 | 0.00 | 0.21 | |||||||||||
| ☀ | ENST00000426105 | protein_coding | 3567 | 23 | 0.00 | 0.00 | 16 | 0.00 | 0.19 | 3 | 40.20 | 22.84 | protein_coding | 3567 | 24.48 | A:1 | |||