CPG ID : 12_0498_00 Gene Name : integrin subunit alpha 7
NCBI Gene ID : 3679 NCBI RefSeq : NM_002206 NCBI Protein: NP_002197
MANE Gene ID : ENSG00000135424 MANE Select ID : ENST00000257879 MANE Protein ID : ENSP00000257879
Chromosome : NC_000012.12 Start : 55684568 End : 55707904
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000554327 nonsense_mediated_decay 328 1 29.58 30.99 10 0.04 1.93
ENST00000553804 protein_coding 3426 2 23.72 24.84 4 0.17 8.71 1 39.70 52.65 protein_coding 3426 56.42 A:1
ENST00000554543 retained_intron 0 3 11.41 11.95 13 0.02 0.77
ENST00000557058 retained_intron 0 4 9.61 10.07 3 0.29 14.89 9 0.17 0.23 retained_intron 0
ENST00000257879 protein_coding 3414 5 7.53 7.89 1 0.47 24.33 2 25.10 33.29 protein_coding 3414 35.67 A:2
ENST00000347027 protein_coding 3396 6 3.54 3.71 5 0.16 8.27 3 4.45 5.90 protein_coding 3396 6.32
ENST00000553276 retained_intron 0 7 1.91 2.00 11 0.03 1.71
ENST00000555728 protein_coding 3546 8 1.16 1.22 8 0.11 5.54 8 0.48 0.64 protein_coding 3546 0.69 P:3
ENST00000557488 retained_intron 0 9 1.09 1.14 12 0.07 0.09 retained_intron 0
ENST00000554359 retained_intron 0 10 1.09 1.14 6 0.13 6.48 4 3.13 4.16 retained_intron 0
ENST00000557555 protein_coding 617 11 1.04 1.09 2 0.33 16.77 7 0.64 0.84 protein_coding 447 0.90
ENST00000555809 nonsense_mediated_decay 147 12 0.92 0.96 7 0.12 6.39 6 0.69 0.92 nonsense_mediated_decay 147
ENST00000556371 retained_intron 0 13 0.77 0.81 11 0.10 0.13 retained_intron 0
ENST00000555687 nonsense_mediated_decay 168 14 0.74 0.78 12 0.03 1.45
ENST00000554724 nonsense_mediated_decay 106 15 0.49 0.52
ENST00000553893 nonsense_mediated_decay 147 16 0.28 0.29 14 0.01 0.47 5 0.77 1.02 nonsense_mediated_decay 147
ENST00000556273 nonsense_mediated_decay 297 17 0.26 0.27 15 0.00 0.09
ENST00000452168 protein_coding 3135 18 0.19 0.20 9 0.04 2.14
ENST00000553737 retained_intron 0 19 0.12 0.13 16 0.00 0.05 10 0.10 0.13 retained_intron 0
ENST00000557257 protein_coding 460 20 0.02 0.02




GSE  ENSG00000135424_ITGA7



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