CPG ID : 14_0145_00 Gene Name : NOVA alternative splicing regulator 1
NCBI Gene ID : 4857 NCBI RefSeq : NM_002515 NCBI Protein: NP_002506
MANE Gene ID : ENSG00000139910 MANE Select ID : ENST00000539517 MANE Protein ID : ENSP00000438875
Chromosome : NC_000014.9 Start : 26443090 End : 26598033
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000539517 protein_coding 1524 1 3.41 24.66 1 62.25 81.98 3 38.38 21.13 protein_coding 1524 21.41 P:1
ENST00000344429 protein_coding 546 2 2.88 20.87 3 3.14 4.13 4 32.85 18.09 protein_coding 546 18.33
ENST00000483536 nonsense_mediated_decay 366 3 2.82 20.42 2 7.51 9.89 6 1.89 1.04 nonsense_mediated_decay 366
ENST00000547619 protein_coding 636 4 2.33 16.86 4 1.77 2.32 2 40.57 22.34 protein_coding 636 22.64
ENST00000465357 protein_coding 1452 5 0.90 6.51 8 0.25 0.32 5 6.73 3.70 protein_coding 1452 3.75
ENST00000574031 protein_coding 459 6 0.35 2.54 5 0.37 0.49 1 58.29 32.09 protein_coding 459 32.53
ENST00000549146 protein_coding 289 7 0.33 2.39 9 0.07 0.09 7 1.34 0.74 protein_coding 289 0.75
ENST00000549571 protein_coding 520 8 0.28 2.01 6 0.29 0.39 8 0.98 0.54 protein_coding 520 0.55
ENST00000547415 retained_intron 0 9 0.18 1.31 7 0.28 0.36 9 0.40 0.22 retained_intron 0
ENST00000546546 nonsense_mediated_decay 150 10 0.17 1.26 11 0.01 0.01 10 0.13 0.07 nonsense_mediated_decay 150
ENST00000347476 protein_coding 327 11 0.07 0.47
ENST00000551754 processed_transcript 0 12 0.06 0.47 10 0.01 0.01
ENST00000449198 protein_coding 832 13 0.03 0.22 12 0.00 0.00 11 0.07 0.04 protein_coding 832 0.04



GSE  ENSG00000139910_NOVA1



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