| CPG ID : 11_0590_00 | Gene Name : cleavage and polyadenylation specific factor 7 | |
|---|---|---|
| NCBI Gene ID : 79869 | NCBI RefSeq : NM_001142565 | NCBI Protein: NP_001136037 |
|---|---|---|
| MANE Gene ID : ENSG00000149532 | MANE Select ID : ENST00000439958 | MANE Protein ID : ENSP00000397203 |
| Chromosome : NC_000011.10 | Start : 61402729 | End : 61429975 |
| Strand : - | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ☀ | ENST00000439958 | protein_coding | 1389 | 1 | 22.44 | 45.10 | ☀ | 2 | 0.79 | 34.54 | 2 | 70.80 | 37.75 | protein_coding | 1389 | 38.21 | P:4 | ||
| ENST00000394888 | protein_coding | 1416 | 2 | 15.04 | 30.22 | 1 | 0.90 | 39.28 | ☀ | 1 | 78.05 | 41.61 | ☀ | protein_coding | 1416 | 42.12 | A:1 | ||
| ENST00000537641 | retained_intron | 0 | 3 | 3.63 | 7.29 | 3 | 0.19 | 8.28 | |||||||||||
| ENST00000340437 | protein_coding | 1545 | 4 | 1.56 | 3.14 | 5 | 0.11 | 4.85 | 5 | 2.19 | 1.17 | protein_coding | 1545 | 1.18 | |||||
| ENST00000544669 | retained_intron | 0 | 5 | 1.40 | 2.81 | 6 | 0.06 | 2.81 | 9 | 0.46 | 0.24 | retained_intron | 0 | ||||||
| ENST00000494016 | processed_transcript | 0 | 6 | 1.32 | 2.65 | 7 | 0.03 | 1.40 | 6 | 0.77 | 0.41 | processed_transcript | 0 | ||||||
| ENST00000536548 | nonsense_mediated_decay | 306 | 7 | 0.85 | 1.72 | ||||||||||||||
| ENST00000536145 | nonsense_mediated_decay | 306 | 8 | 0.57 | 1.15 | ||||||||||||||
| ENST00000477890 | protein_coding | 1124 | 9 | 0.45 | 0.90 | 10 | 0.00 | 0.21 | 13 | 0.11 | 0.06 | protein_coding | 1124 | 0.06 | |||||
| ENST00000448745 | protein_coding | 1389 | 10 | 0.41 | 0.83 | 9 | 0.01 | 0.35 | 4 | 4.61 | 2.46 | protein_coding | 1389 | 2.49 | P:4 | ||||
| ENST00000535222 | nonsense_mediated_decay | 303 | 11 | 0.36 | 0.73 | 8 | 0.01 | 0.54 | 8 | 0.48 | 0.26 | nonsense_mediated_decay | 303 | ||||||
| ENST00000541963 | protein_coding | 297 | 12 | 0.34 | 0.68 | 17 | 0.03 | 0.02 | protein_coding | 297 | 0.02 | ||||||||
| ENST00000474684 | retained_intron | 0 | 13 | 0.30 | 0.61 | 4 | 0.17 | 7.40 | 12 | 0.20 | 0.11 | retained_intron | 0 | ||||||
| ENST00000543545 | nonsense_mediated_decay | 282 | 14 | 0.25 | 0.51 | 15 | 0.07 | 0.04 | nonsense_mediated_decay | 282 | |||||||||
| ENST00000537162 | nonsense_mediated_decay | 306 | 15 | 0.23 | 0.46 | 12 | 0.00 | 0.11 | 11 | 0.27 | 0.14 | nonsense_mediated_decay | 306 | ||||||
| ENST00000489728 | retained_intron | 0 | 16 | 0.16 | 0.33 | ||||||||||||||
| ENST00000545934 | processed_transcript | 0 | 17 | 0.11 | 0.23 | ||||||||||||||
| ENST00000463244 | processed_transcript | 0 | 18 | 0.11 | 0.22 | 16 | 0.04 | 0.02 | processed_transcript | 0 | |||||||||
| ENST00000450000 | protein_coding | 437 | 19 | 0.07 | 0.13 | 14 | 0.07 | 0.04 | protein_coding | 437 | 0.04 | ||||||||
| ENST00000626926 | protein_coding | 306 | 20 | 0.06 | 0.13 | ||||||||||||||
| ENST00000539952 | protein_coding | 864 | 21 | 0.03 | 0.06 | 11 | 0.00 | 0.18 | 10 | 0.33 | 0.18 | protein_coding | 864 | 0.18 | |||||
| ENST00000544990 | nonsense_mediated_decay | 309 | 22 | 0.03 | 0.06 | ||||||||||||||
| ENST00000449811 | protein_coding | 431 | 23 | 0.01 | 0.03 | 13 | 0.00 | 0.07 | |||||||||||
| ENST00000413184 | protein_coding | 415 | 24 | 0.01 | 0.02 | ||||||||||||||
| ENST00000413232 | protein_coding | 614 | 25 | 0.00 | 0.01 | 7 | 0.64 | 0.34 | protein_coding | 614 | 0.34 | ||||||||
| ENST00000544585 | protein_coding | 658 | 26 | 0.00 | 0.00 | 3 | 28.46 | 15.17 | protein_coding | 658 | 15.36 | ||||||||