CPG ID : 11_0590_00 Gene Name : cleavage and polyadenylation specific factor 7
NCBI Gene ID : 79869 NCBI RefSeq : NM_001142565 NCBI Protein: NP_001136037
MANE Gene ID : ENSG00000149532 MANE Select ID : ENST00000439958 MANE Protein ID : ENSP00000397203
Chromosome : NC_000011.10 Start : 61402729 End : 61429975
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000439958 protein_coding 1389 1 22.44 45.10 2 0.79 34.54 2 70.80 37.75 protein_coding 1389 38.21 P:4
ENST00000394888 protein_coding 1416 2 15.04 30.22 1 0.90 39.28 1 78.05 41.61 protein_coding 1416 42.12 A:1
ENST00000537641 retained_intron 0 3 3.63 7.29 3 0.19 8.28
ENST00000340437 protein_coding 1545 4 1.56 3.14 5 0.11 4.85 5 2.19 1.17 protein_coding 1545 1.18
ENST00000544669 retained_intron 0 5 1.40 2.81 6 0.06 2.81 9 0.46 0.24 retained_intron 0
ENST00000494016 processed_transcript 0 6 1.32 2.65 7 0.03 1.40 6 0.77 0.41 processed_transcript 0
ENST00000536548 nonsense_mediated_decay 306 7 0.85 1.72
ENST00000536145 nonsense_mediated_decay 306 8 0.57 1.15
ENST00000477890 protein_coding 1124 9 0.45 0.90 10 0.00 0.21 13 0.11 0.06 protein_coding 1124 0.06
ENST00000448745 protein_coding 1389 10 0.41 0.83 9 0.01 0.35 4 4.61 2.46 protein_coding 1389 2.49 P:4
ENST00000535222 nonsense_mediated_decay 303 11 0.36 0.73 8 0.01 0.54 8 0.48 0.26 nonsense_mediated_decay 303
ENST00000541963 protein_coding 297 12 0.34 0.68 17 0.03 0.02 protein_coding 297 0.02
ENST00000474684 retained_intron 0 13 0.30 0.61 4 0.17 7.40 12 0.20 0.11 retained_intron 0
ENST00000543545 nonsense_mediated_decay 282 14 0.25 0.51 15 0.07 0.04 nonsense_mediated_decay 282
ENST00000537162 nonsense_mediated_decay 306 15 0.23 0.46 12 0.00 0.11 11 0.27 0.14 nonsense_mediated_decay 306
ENST00000489728 retained_intron 0 16 0.16 0.33
ENST00000545934 processed_transcript 0 17 0.11 0.23
ENST00000463244 processed_transcript 0 18 0.11 0.22 16 0.04 0.02 processed_transcript 0
ENST00000450000 protein_coding 437 19 0.07 0.13 14 0.07 0.04 protein_coding 437 0.04
ENST00000626926 protein_coding 306 20 0.06 0.13
ENST00000539952 protein_coding 864 21 0.03 0.06 11 0.00 0.18 10 0.33 0.18 protein_coding 864 0.18
ENST00000544990 nonsense_mediated_decay 309 22 0.03 0.06
ENST00000449811 protein_coding 431 23 0.01 0.03 13 0.00 0.07
ENST00000413184 protein_coding 415 24 0.01 0.02
ENST00000413232 protein_coding 614 25 0.00 0.01 7 0.64 0.34 protein_coding 614 0.34
ENST00000544585 protein_coding 658 26 0.00 0.00 3 28.46 15.17 protein_coding 658 15.36



GSE  ENSG00000149532_CPSF7



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