CPG ID : 21_0155_00 Gene Name : U2 small nuclear RNA auxiliary factor 1
NCBI Gene ID : 7307 NCBI RefSeq : NM_006758 NCBI Protein: NP_006749
MANE Gene ID : ENSG00000160201 MANE Select ID : ENST00000291552 MANE Protein ID : ENSP00000291552
Chromosome : NC_000021.9 Start : 43092956 End : 43107570
Strand : - MANE Plus Clinical :
GSE All Transcripts GTEx v9 GTEx v8
Rank TPM Exp
Tx%
Ref
Tx
Tau Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS MANE
Select
Transcript ID Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type
(GENCODE v26)
CDS
length
2 202.14 35.19 0.481 protein_coding 723 39.12 P:4 M ENST00000291552 1 60.54 61.22 1 41.11 69.84 protein_coding 723
1 292.85 50.98 0.500 protein_coding 723 56.68 A:2 ENST00000380276 2 35.60 36.00 2 6.43 10.92 protein_coding 723
5 10.47 1.82 0.799 retained_intron 0 ENST00000478282 4 0.63 0.64 3 4.60 7.81 retained_intron 0
6 7.90 1.38 0.708 retained_intron 0 ENST00000496462 3 1.49 1.51 4 2.37 4.02 retained_intron 0
7 6.01 1.05 0.821 retained_intron 0 ENST00000475639 6 0.10 0.10 5 1.58 2.69 retained_intron 0
4 17.31 3.01 0.522 protein_coding 504 3.35 ENST00000459639 7 0.08 0.08 6 1.09 1.85 protein_coding 504
9 4.41 0.77 0.717 protein_coding 504 0.85 ENST00000398137 8 0.01 0.01 7 0.76 1.29 protein_coding 504
ENST00000468039 8 0.36 0.62 retained_intron 0
3 27.77 4.83 0.536 retained_intron 0 ENST00000471250 5 0.43 0.43 9 0.33 0.55 retained_intron 0
ENST00000463599 10 0.14 0.24 retained_intron 0
10 0.02 0.00 1.000 nonsense_mediated_decay 138 ENST00000486519 9 0.00 0.00 11 0.09 0.15 nonsense_mediated_decay 138
8 5.52 0.96 0.792 nonsense_mediated_decay 228 ENST00000464750 12 0.01 0.02 nonsense_mediated_decay 228



GSE  ENSG00000160201_U2AF1



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