| CPG ID : 19_0676_00 | Gene Name : U2 small nuclear RNA auxiliary factor 1 like 4 | |
|---|---|---|
| NCBI Gene ID : 199746 | NCBI RefSeq : NM_001040425 | NCBI Protein: NP_001035515 |
|---|---|---|
| MANE Gene ID : ENSG00000161265 | MANE Select ID : ENST00000378975 | MANE Protein ID : ENSP00000368258 |
| Chromosome : NC_000019.10 | Start : 35742527 | End : 35745418 |
| Strand : - | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000585554 | retained_intron | 0 | 1 | 7.56 | 21.85 | 3 | 5.22 | 16.53 | 3 | 4.84 | 8.63 | retained_intron | 0 | ||||||
| ENST00000292879 | protein_coding | 609 | 2 | 3.47 | 10.02 | ☀ | 1 | 8.08 | 25.57 | ☀ | 1 | 29.00 | 51.67 | ☀ | protein_coding | 609 | 87.58 | ||
| ENST00000591084 | nonsense_mediated_decay | 123 | 3 | 3.33 | 9.63 | 5 | 2.98 | 9.45 | 10 | 0.77 | 1.37 | nonsense_mediated_decay | 123 | ||||||
| ENST00000592913 | retained_intron | 0 | 4 | 2.52 | 7.29 | 2 | 5.33 | 16.88 | 2 | 5.76 | 10.26 | retained_intron | 0 | ||||||
| ENST00000601236 | nonsense_mediated_decay | 201 | 5 | 2.51 | 7.24 | 16 | 0.02 | 0.07 | 17 | 0.13 | 0.24 | nonsense_mediated_decay | 201 | ||||||
| ENST00000588980 | retained_intron | 0 | 6 | 2.40 | 6.94 | 7 | 1.83 | 5.80 | |||||||||||
| ENST00000588100 | processed_transcript | 0 | 7 | 2.30 | 6.66 | 14 | 0.11 | 0.34 | 9 | 1.33 | 2.38 | processed_transcript | 0 | ||||||
| ENST00000586476 | retained_intron | 0 | 8 | 1.75 | 5.06 | 9 | 0.46 | 1.46 | 5 | 3.02 | 5.38 | retained_intron | 0 | ||||||
| ENST00000585771 | retained_intron | 0 | 9 | 1.71 | 4.93 | 17 | 0.02 | 0.05 | |||||||||||
| ENST00000587987 | nonsense_mediated_decay | 120 | 10 | 1.22 | 3.53 | 4 | 3.28 | 10.38 | 11 | 0.61 | 1.08 | nonsense_mediated_decay | 120 | ||||||
| ENST00000600296 | nonsense_mediated_decay | 214 | 11 | 1.19 | 3.45 | 18 | 0.11 | 0.20 | nonsense_mediated_decay | 214 | |||||||||
| ENST00000591057 | nonsense_mediated_decay | 156 | 12 | 0.83 | 2.40 | 13 | 0.20 | 0.65 | 12 | 0.46 | 0.83 | nonsense_mediated_decay | 156 | ||||||
| ENST00000589429 | nonsense_mediated_decay | 111 | 13 | 0.83 | 2.39 | 10 | 0.42 | 1.32 | 14 | 0.25 | 0.45 | nonsense_mediated_decay | 111 | ||||||
| ENST00000588892 | retained_intron | 0 | 14 | 0.82 | 2.37 | 12 | 0.25 | 0.79 | 8 | 1.47 | 2.62 | retained_intron | 0 | ||||||
| ENST00000594792 | nonsense_mediated_decay | 102 | 15 | 0.56 | 1.61 | 11 | 0.36 | 1.14 | 16 | 0.21 | 0.38 | nonsense_mediated_decay | 102 | ||||||
| ENST00000591855 | retained_intron | 0 | 16 | 0.47 | 1.37 | 15 | 0.02 | 0.08 | 6 | 2.20 | 3.93 | retained_intron | 0 | ||||||
| ENST00000412391 | protein_coding | 663 | 17 | 0.42 | 1.20 | 6 | 2.13 | 6.74 | 13 | 0.27 | 0.48 | protein_coding | 663 | 0.81 | P:1 | ||||
| ☀ | ENST00000378975 | protein_coding | 546 | 18 | 0.24 | 0.69 | 8 | 0.86 | 2.73 | 4 | 3.81 | 6.79 | protein_coding | 546 | 11.52 | ||||
| ENST00000590650 | retained_intron | 0 | 19 | 0.19 | 0.55 | 15 | 0.23 | 0.42 | retained_intron | 0 | |||||||||
| ENST00000587886 | protein_coding | 30 | 20 | 0.15 | 0.43 | 19 | 0.00 | 0.00 | 19 | 0.03 | 0.06 | protein_coding | 30 | 0.10 | |||||
| ENST00000590135 | retained_intron | 0 | 21 | 0.14 | 0.40 | 18 | 0.00 | 0.01 | 7 | 1.60 | 2.85 | retained_intron | 0 | ||||||