CPG Cards

CPG ID : 03_0420_00	Gene Name : sarcolemma associated protein

NCBI Gene ID : 7871	NCBI RefSeq : NM_001377540	NCBI Protein: NP_001364469
MANE Gene ID : ENSG00000163681	MANE Select ID : ENST00000671191	MANE Protein ID : ENSP00000499458
Chromosome : NC_000003.12	Start : 57756309	End : 57930003
Strand : +	MANE Plus Clinical :

TEx_MST : SLMAP

TREGT : SLMAP

GSE								All Transcripts		GTEx v9				GTEx v8
Rank	TPM	Exp Tx%	Ref Tx	Tx-Type (GENCODE v34)	CDS length	PC Tx%	APPRIS	MANE Select	Transcript ID	Rank	TPM	Exp Tx%	Ref Tx	Rank	TPM	Exp Tx%	Ref Tx	Tx-Type (GENCODE v26)	CDS length
									ENST00000417128	1	2.58	32.82	☀	1	21.52	54.46	■	protein_coding	1229
1	112.72	35.56	★	protein_coding	2436	36.63	A:1		ENST00000295951	2	2.01	25.65		2	3.15	7.98		protein_coding	2436
17	0.11	0.04		protein_coding	2436	0.04	A:1		ENST00000295952	19	0.00	0.01		3	2.29	5.81		protein_coding	2436
10	1.97	0.62		retained_intron	0				ENST00000476471	12	0.06	0.73		4	1.97	4.98		retained_intron	0
14	0.17	0.05		retained_intron	0				ENST00000497084	6	0.23	2.98		5	1.80	4.55		retained_intron	0
9	1.98	0.62		protein_coding	949	0.64			ENST00000438794	3	1.41	17.93		6	1.75	4.44		protein_coding	949
									ENST00000495364	11	0.06	0.79		7	1.75	4.43		protein_coding	1089
4	50.82	16.03		protein_coding	1080	16.51			ENST00000494088	7	0.18	2.34		8	1.01	2.55		protein_coding	957
									ENST00000472546	10	0.10	1.24		9	0.86	2.18		processed_transcript	0
6	2.43	0.77		protein_coding	2241	0.79			ENST00000428312	8	0.17	2.22		10	0.68	1.72		protein_coding	2487
7	2.21	0.70		protein_coding	2373	0.72	A:1		ENST00000449503	9	0.13	1.64		11	0.49	1.25		protein_coding	2373
12	0.60	0.19		retained_intron	0				ENST00000459654	13	0.03	0.38		12	0.42	1.07		retained_intron	0
13	0.33	0.11		retained_intron	0				ENST00000466255	17	0.00	0.04		13	0.34	0.85		protein_coding	328
18	0.07	0.02		protein_coding	511	0.02			ENST00000465203	15	0.00	0.04		14	0.27	0.69		protein_coding	511
11	1.34	0.42		retained_intron	0				ENST00000461354	14	0.00	0.05		15	0.27	0.68		protein_coding	305
									ENST00000383718	4	0.61	7.71		16	0.27	0.67		protein_coding	1521
19	0.07	0.02		processed_transcript	0				ENST00000481846					17	0.23	0.57		processed_transcript	0
									ENST00000467901	5	0.26	3.35		18	0.14	0.35		retained_intron	0
									ENST00000475055	20	0.00	0.01		19	0.12	0.31		processed_transcript	0
									ENST00000416658	16	0.00	0.04		20	0.11	0.27		protein_coding	1300
16	0.13	0.04		protein_coding	197	0.04			ENST00000460223	18	0.00	0.02		21	0.07	0.17		protein_coding	197

		GSE
MANE Select	No Match Transcript ID	Rank	TPM	Exp Tx%	Ref Tx	Tx-Type (GENCODE v34)	CDS length	PC Tx%	APPRIS
M	ENST00000671191	2	76.13	24.01		protein_coding	2529	24.74	P:4
	ENST00000659705	3	59.02	18.62		protein_coding	2487	19.18	A:1
	ENST00000662629	5	4.68	1.48		nonsense_mediated_decay	130
	ENST00000670768	8	2.13	0.67		protein_coding	1433	0.69
	ENST00000658689	15	0.14	0.04		nonsense_mediated_decay	85

GSE ENSG00000163681_SLMAP

TPM Log2 Log10