CPG Cards

CPG ID : 03_0420_00	Gene Name : sarcolemma associated protein

NCBI Gene ID : 7871	NCBI RefSeq : NM_001377540	NCBI Protein: NP_001364469
MANE Gene ID : ENSG00000163681	MANE Select ID : ENST00000671191	MANE Protein ID : ENSP00000499458
Chromosome : NC_000003.12	Start : 57756309	End : 57930003
Strand : +	MANE Plus Clinical :

TEx_MST : SLMAP

TREGT : SLMAP

		GENCODE V26		GTEx V8				GTEx V9				GSE				GENCODE V34
MANE Match	Transcript ID	Tx-Type	CDS length	Rank	TPM	Exp Tx%	Ref Tx	Rank	TPM	Exp Tx%	Ref Tx	Rank	TPM	Exp Tx%	Ref Tx	Tx-Type	CDS length	PC Tx%	APPRIS
	ENST00000417128	protein_coding	1229	1	21.52	54.46	☀	1	2.58	32.82	☀
	ENST00000295951	protein_coding	2436	2	3.15	7.98		2	2.01	25.65		1	112.72	35.56	☀	protein_coding	2436	36.63	A:1
	ENST00000295952	protein_coding	2436	3	2.29	5.81		19	0.00	0.01		17	0.11	0.04		protein_coding	2436	0.04	A:1
	ENST00000476471	retained_intron	0	4	1.97	4.98		12	0.06	0.73		10	1.97	0.62		retained_intron	0
	ENST00000497084	retained_intron	0	5	1.80	4.55		6	0.23	2.98		14	0.17	0.05		retained_intron	0
	ENST00000438794	protein_coding	949	6	1.75	4.44		3	1.41	17.93		9	1.98	0.62		protein_coding	949	0.64
	ENST00000495364	protein_coding	1089	7	1.75	4.43		11	0.06	0.79
	ENST00000494088	protein_coding	957	8	1.01	2.55		7	0.18	2.34		4	50.82	16.03		protein_coding	1080	16.51
	ENST00000472546	processed_transcript	0	9	0.86	2.18		10	0.10	1.24
	ENST00000428312	protein_coding	2487	10	0.68	1.72		8	0.17	2.22		6	2.43	0.77		protein_coding	2241	0.79
	ENST00000449503	protein_coding	2373	11	0.49	1.25		9	0.13	1.64		7	2.21	0.70		protein_coding	2373	0.72	A:1
	ENST00000459654	retained_intron	0	12	0.42	1.07		13	0.03	0.38		12	0.60	0.19		retained_intron	0
	ENST00000466255	protein_coding	328	13	0.34	0.85		17	0.00	0.04		13	0.33	0.11		retained_intron	0
	ENST00000465203	protein_coding	511	14	0.27	0.69		15	0.00	0.04		18	0.07	0.02		protein_coding	511	0.02
	ENST00000461354	protein_coding	305	15	0.27	0.68		14	0.00	0.05		11	1.34	0.42		retained_intron	0
	ENST00000383718	protein_coding	1521	16	0.27	0.67		4	0.61	7.71
	ENST00000481846	processed_transcript	0	17	0.23	0.57						19	0.07	0.02		processed_transcript	0
	ENST00000467901	retained_intron	0	18	0.14	0.35		5	0.26	3.35
	ENST00000475055	processed_transcript	0	19	0.12	0.31		20	0.00	0.01
	ENST00000416658	protein_coding	1300	20	0.11	0.27		16	0.00	0.04
	ENST00000460223	protein_coding	197	21	0.07	0.17		18	0.00	0.02		16	0.13	0.04		protein_coding	197	0.04

		GSE				GTEx V34
MANE Match	No Match Transcript ID	Rank	TPM	Exp Tx%	Ref Tx	Tx-Type	CDS length	PC Tx%	APPRIS
☀	ENST00000671191	2	76.13	24.01		protein_coding	2529	24.74	P:4
	ENST00000659705	3	59.02	18.62		protein_coding	2487	19.18	A:1
	ENST00000662629	5	4.68	1.48		nonsense_mediated_decay	130
	ENST00000670768	8	2.13	0.67		protein_coding	1433	0.69
	ENST00000658689	15	0.14	0.04		nonsense_mediated_decay	85

GSE ENSG00000163681_SLMAP

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