CPG ID : 03_0275_00 Gene Name : shisa family member 5
NCBI Gene ID : 51246 NCBI RefSeq : NM_016479 NCBI Protein: NP_057563
MANE Gene ID : ENSG00000164054 MANE Select ID : ENST00000296444 MANE Protein ID : ENSP00000296444
Chromosome : NC_000003.12 Start : 48467876 End : 48504174
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000426002 protein_coding 414 1 41.76 49.71 1 25.09 68.95 1 463.46 60.72 protein_coding 414 65.25
ENST00000296444 protein_coding 723 2 10.77 12.81 2 7.87 21.62 2 225.93 29.60 protein_coding 723 31.81 P:2
ENST00000612611 protein_coding 513 3 8.60 10.24 8 0.07 0.20
ENST00000444115 protein_coding 630 4 5.39 6.41 10 0.05 0.15 8 4.12 0.54 protein_coding 630 0.58 A:2
ENST00000466424 processed_transcript 0 5 4.59 5.46 3 1.26 3.45 10 0.85 0.11 processed_transcript 0
ENST00000494854 retained_intron 0 6 3.79 4.51 4 0.72 1.98 3 38.41 5.03 retained_intron 0
ENST00000443308 protein_coding 702 7 3.30 3.93 13 0.01 0.03 7 4.63 0.61 protein_coding 702 0.65
ENST00000442747 protein_coding 630 8 2.34 2.79 5 0.58 1.59 4 11.90 1.56 protein_coding 630 1.68 A:2
ENST00000417841 protein_coding 337 9 0.91 1.08 16 0.00 0.00 14 0.07 0.01 protein_coding 337 0.01
ENST00000465449 processed_transcript 0 10 0.90 1.07 6 0.51 1.40 6 5.83 0.76 processed_transcript 0
ENST00000497863 retained_intron 0 11 0.63 0.75 11 0.43 0.06 retained_intron 0
ENST00000486344 processed_transcript 0 12 0.30 0.36 12 0.01 0.04 9 1.31 0.17 processed_transcript 0
ENST00000460758 retained_intron 0 13 0.21 0.25 11 0.02 0.05 5 5.90 0.77 retained_intron 0
ENST00000417962 nonsense_mediated_decay 142 14 0.11 0.13 17 0.00 0.00 13 0.14 0.02 nonsense_mediated_decay 142
ENST00000619810 protein_coding 630 15 0.10 0.12 15 0.00 0.01 12 0.14 0.02 protein_coding 630 0.02 A:2
ENST00000415268 nonsense_mediated_decay 186 16 0.10 0.11 15 0.03 0.00 nonsense_mediated_decay 186
ENST00000424965 nonsense_mediated_decay 372 17 0.08 0.10 7 0.13 0.36
ENST00000490864 processed_transcript 0 18 0.06 0.07 17 0.03 0.00 processed_transcript 0
ENST00000441507 nonsense_mediated_decay 135 19 0.05 0.06 9 0.06 0.15 16 0.03 0.00 nonsense_mediated_decay 135
ENST00000496408 processed_transcript 0 20 0.03 0.03 14 0.01 0.01



GSE  ENSG00000164054_SHISA5



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