| CPG ID : 11_0723_00 | Gene Name : latent transforming growth factor beta binding protein 3 | |
|---|---|---|
| NCBI Gene ID : 4054 | NCBI RefSeq : NM_001130144 | NCBI Protein: NP_001123616 |
|---|---|---|
| MANE Gene ID : ENSG00000168056 | MANE Select ID : ENST00000301873 | MANE Protein ID : ENSP00000301873 |
| Chromosome : NC_000011.10 | Start : 65538559 | End : 65558359 |
| Strand : - | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000322147 | protein_coding | 3771 | 1 | 30.74 | 28.74 | ☀ | 2 | 0.87 | 19.24 | ☀ | 1 | 156.08 | 38.51 | ☀ | protein_coding | 3771 | 41.41 | ||
| ENST00000532932 | protein_coding | 2202 | 2 | 11.55 | 10.80 | 5 | 0.23 | 5.19 | 3 | 46.15 | 11.39 | protein_coding | 2202 | 12.24 | |||||
| ENST00000529582 | retained_intron | 0 | 3 | 9.12 | 8.53 | 4 | 0.24 | 5.33 | 5 | 17.28 | 4.26 | retained_intron | 0 | ||||||
| ENST00000527792 | retained_intron | 0 | 4 | 7.46 | 6.97 | 7 | 0.13 | 2.81 | 8 | 3.37 | 0.83 | retained_intron | 0 | ||||||
| ENST00000530866 | protein_coding | 3410 | 5 | 6.73 | 6.29 | 6 | 0.23 | 5.03 | |||||||||||
| ☀ | ENST00000301873 | protein_coding | 3912 | 6 | 6.12 | 5.72 | 3 | 0.33 | 7.25 | 2 | 117.96 | 29.11 | protein_coding | 3912 | 31.29 | P:1 | |||
| ENST00000525443 | retained_intron | 0 | 7 | 5.83 | 5.46 | 1 | 2.22 | 49.14 | 7 | 3.87 | 0.95 | retained_intron | 0 | ||||||
| ENST00000530785 | protein_coding | 921 | 8 | 3.95 | 3.69 | 13 | 0.01 | 0.20 | 11 | 1.43 | 0.35 | protein_coding | 921 | 0.38 | |||||
| ENST00000532661 | protein_coding | 665 | 9 | 3.66 | 3.42 | 10 | 0.03 | 0.64 | 4 | 43.81 | 10.81 | protein_coding | 665 | 11.62 | |||||
| ENST00000527339 | protein_coding | 423 | 10 | 3.65 | 3.41 | 9 | 0.09 | 1.99 | 9 | 1.67 | 0.41 | protein_coding | 423 | 0.44 | |||||
| ENST00000529189 | protein_coding | 780 | 11 | 3.59 | 3.36 | 11 | 0.01 | 0.24 | 6 | 9.31 | 2.30 | protein_coding | 780 | 2.47 | |||||
| ENST00000528966 | retained_intron | 0 | 12 | 3.44 | 3.22 | 8 | 0.10 | 2.20 | 12 | 1.00 | 0.25 | retained_intron | 0 | ||||||
| ENST00000526927 | protein_coding | 2722 | 13 | 2.93 | 2.74 | 17 | 0.00 | 0.04 | |||||||||||
| ENST00000529764 | retained_intron | 0 | 14 | 1.69 | 1.58 | 14 | 0.01 | 0.19 | 17 | 0.13 | 0.03 | retained_intron | 0 | ||||||
| ENST00000530990 | retained_intron | 0 | 15 | 1.43 | 1.34 | 19 | 0.00 | 0.03 | 13 | 0.83 | 0.21 | retained_intron | 0 | ||||||
| ENST00000524798 | retained_intron | 0 | 16 | 1.37 | 1.28 | 15 | 0.01 | 0.17 | 15 | 0.17 | 0.04 | retained_intron | 0 | ||||||
| ENST00000526124 | retained_intron | 0 | 17 | 1.15 | 1.08 | 18 | 0.00 | 0.03 | 16 | 0.17 | 0.04 | retained_intron | 0 | ||||||
| ENST00000526825 | nonsense_mediated_decay | 208 | 18 | 0.98 | 0.91 | ||||||||||||||
| ENST00000528516 | nonsense_mediated_decay | 351 | 19 | 0.78 | 0.73 | 16 | 0.00 | 0.04 | 10 | 1.52 | 0.37 | nonsense_mediated_decay | 351 | ||||||
| ENST00000529371 | protein_coding | 371 | 20 | 0.41 | 0.38 | 20 | 0.00 | 0.02 | 14 | 0.43 | 0.11 | protein_coding | 371 | 0.12 | |||||
| ENST00000530426 | protein_coding | 431 | 21 | 0.38 | 0.35 | 12 | 0.01 | 0.21 | 18 | 0.10 | 0.02 | protein_coding | 431 | 0.03 | |||||