CPG ID : 11_0689_00 Gene Name : splicing factor 1
NCBI Gene ID : 7536 NCBI RefSeq : NM_004630 NCBI Protein: NP_004621
MANE Gene ID : ENSG00000168066 MANE Select ID : ENST00000377390 MANE Protein ID : ENSP00000366607
Chromosome : NC_000011.10 Start : 64764606 End : 64778542
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000377390 protein_coding 1920 1 46.98 27.42 1 7.40 54.29 3 230.95 17.19 protein_coding 1920 36.75 A:1
ENST00000486960 retained_intron 0 2 34.79 20.31 5 0.40 2.90 14 1.00 0.07 retained_intron 0
ENST00000227503 protein_coding 1647 3 25.71 15.01 14 0.01 0.05 2 277.61 20.66 protein_coding 1647 44.17 A:1
ENST00000448404 nonsense_mediated_decay 333 4 16.93 9.88 4 0.51 3.76 8 5.36 0.40 nonsense_mediated_decay 333
ENST00000489544 processed_transcript 0 5 13.06 7.62 20 0.00 0.01 10 2.34 0.17 processed_transcript 0
ENST00000482693 retained_intron 0 6 8.66 5.05 7 0.24 1.74 6 11.23 0.84 retained_intron 0
ENST00000472725 retained_intron 0 7 5.53 3.23 18 0.00 0.02 13 1.03 0.08 retained_intron 0
ENST00000486867 protein_coding 875 8 5.24 3.06 9 0.05 0.34 16 0.84 0.06 protein_coding 875 0.13
ENST00000334944 protein_coding 1917 9 4.40 2.57 3 0.81 5.95 4 73.44 5.47 protein_coding 1917 11.69 A:1
ENST00000377387 protein_coding 2022 10 2.76 1.61 10 0.04 0.33 15 0.86 0.06 protein_coding 2022 0.14 A:2
ENST00000496969 processed_transcript 0 11 2.10 1.23 6 0.33 2.39 19 0.10 0.01 processed_transcript 0
ENST00000463343 retained_intron 0 12 1.85 1.08 2 3.74 27.43 1 684.50 50.94 retained_intron 0
ENST00000477596 retained_intron 0 13 1.50 0.88 16 0.00 0.03 7 9.00 0.67 retained_intron 0
ENST00000377394 protein_coding 1716 14 0.34 0.20 11 0.03 0.19 5 38.73 2.88 protein_coding 1716 6.16 P:4
ENST00000433274 protein_coding 1842 15 0.30 0.17 8 0.05 0.35 9 2.88 0.21 protein_coding 1842 0.46
ENST00000443908 protein_coding 603 16 0.30 0.17 13 0.01 0.06
ENST00000633899 processed_transcript 0 17 0.25 0.15 19 0.00 0.01
ENST00000413725 protein_coding 541 18 0.25 0.14 12 0.01 0.06 11 1.78 0.13 protein_coding 541 0.28
ENST00000413951 nonsense_mediated_decay 156 19 0.21 0.12 21 0.00 0.01 17 0.81 0.06 nonsense_mediated_decay 156
ENST00000432725 protein_coding 187 20 0.18 0.11 15 0.01 0.04 18 0.19 0.01 protein_coding 187 0.03
ENST00000626028 protein_coding 333 21 0.00 0.00 17 0.00 0.02 12 1.16 0.09 protein_coding 333 0.18




GSE  ENSG00000168066_SF1



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