CPG ID : 09_0297_00 Gene Name : semaphorin 4D
NCBI Gene ID : 10507 NCBI RefSeq : NM_001371194 NCBI Protein: NP_001358123
MANE Gene ID : ENSG00000187764 MANE Select ID : ENST00000422704 MANE Protein ID : ENSP00000388768
Chromosome : NC_000009.12 Start : 89377235 End : 89498113
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000356444 protein_coding 2589 1 6.50 20.96 20 0.24 0.17 protein_coding 2589 0.29 P:1
ENST00000420101 protein_coding 372 2 4.64 14.95 7 0.05 4.88 1 39.20 27.62 protein_coding 372 48.23
ENST00000455551 protein_coding 2217 3 4.22 13.59 6 0.06 6.03 3 15.96 11.25 protein_coding 2217 19.64
ENST00000492386 retained_intron 0 4 3.19 10.28 2 0.20 19.05 2 30.31 21.36 retained_intron 0
ENST00000486935 retained_intron 0 5 2.69 8.65 11 0.01 1.15 6 9.54 6.72 retained_intron 0
ENST00000438547 protein_coding 2589 6 1.64 5.28 12 0.01 0.88 4 13.97 9.85 protein_coding 2589 17.19 P:1
ENST00000450295 protein_coding 2589 7 1.31 4.22 1 0.21 19.88 15 0.58 0.41 protein_coding 2589 0.71 P:1
ENST00000475255 processed_transcript 0 8 1.22 3.94 4 0.14 13.39 5 12.90 9.09 processed_transcript 0
ENST00000540475 protein_coding 198 9 0.85 2.75 16 0.00 0.26 10 1.52 1.07 protein_coding 198 1.87
ENST00000540183 retained_intron 0 10 0.73 2.36 15 0.00 0.31 8 3.40 2.40 retained_intron 0
ENST00000469653 processed_transcript 0 11 0.68 2.18 5 0.10 9.83 13 0.67 0.47 processed_transcript 0
ENST00000429836 nonsense_mediated_decay 1647 12 0.51 1.65 3 0.15 14.45 9 2.16 1.52 nonsense_mediated_decay 1647
ENST00000544513 retained_intron 0 13 0.42 1.36 23 0.07 0.05 retained_intron 0
ENST00000474258 retained_intron 0 14 0.42 1.35 16 0.50 0.35 retained_intron 0
ENST00000420681 protein_coding 439 15 0.37 1.18 13 0.01 0.70 11 1.23 0.86 protein_coding 439 1.51
ENST00000420670 protein_coding 3 16 0.36 1.16
ENST00000422704 protein_coding 2589 17 0.34 1.09 10 0.02 1.43 7 6.58 4.64 protein_coding 2589 8.10 P:1
ENST00000418828 protein_coding 178 18 0.27 0.86 12 1.19 0.84 protein_coding 178 1.46
ENST00000420987 protein_coding 2217 19 0.23 0.74 9 0.03 3.24 17 0.42 0.30 protein_coding 2217 0.52
ENST00000433650 protein_coding 227 20 0.19 0.62 14 0.00 0.32 19 0.27 0.19 protein_coding 227 0.33
ENST00000482128 processed_transcript 0 21 0.15 0.49 17 0.00 0.23 14 0.61 0.43 processed_transcript 0
ENST00000464051 processed_transcript 0 22 0.06 0.19 22 0.10 0.07 processed_transcript 0
ENST00000339861 protein_coding 2217 23 0.04 0.13 8 0.04 3.98 21 0.11 0.08 protein_coding 2217 0.14
ENST00000537934 nonsense_mediated_decay 1647 24 0.00 0.00 18 0.38 0.27 nonsense_mediated_decay 1647



GSE  ENSG00000187764_SEMA4D



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