CPG ID : 0X_0534_00 Gene Name : collagen type IV alpha 5 chain
NCBI Gene ID : 1287 NCBI RefSeq : NM_033380 NCBI Protein: NP_203699
MANE Gene ID : ENSG00000188153 MANE Select ID : ENST00000328300 MANE Protein ID : ENSP00000331902
Chromosome : NC_000023.11 Start : 108439838 End : 108697545
Strand : + MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000328300 protein_coding 5076 1 7.85 37.07 3 0.05 3.32 4 23.05 16.01 protein_coding 5076 23.99 P:4
ENST00000361603 protein_coding 5058 2 4.76 22.46 4 0.05 3.23 3 34.10 23.69 protein_coding 5058 35.49 A:1
ENST00000504541 protein_coding 222 3 4.64 21.88 9 0.00 0.09
ENST00000510690 processed_transcript 0 4 1.46 6.90 7 0.02 1.29 7 0.10 0.07 retained_intron 0
ENST00000483338 retained_intron 0 5 1.11 5.26 1 1.14 80.76 2 38.19 26.53 protein_coding 2088 39.75
ENST00000505728 protein_coding 524 6 0.42 1.98 6 0.04 2.59 6 0.75 0.52 protein_coding 524 0.78
ENST00000470339 retained_intron 0 7 0.39 1.86 2 0.08 5.66 5 7.09 4.92 retained_intron 0
ENST00000477429 processed_transcript 0 8 0.26 1.22 5 0.04 2.63 8 0.03 0.02 processed_transcript 0
ENST00000489230 retained_intron 0 9 0.23 1.07 8 0.01 0.42
ENST00000515658 protein_coding 347 10 0.07 0.31

GSE GTEx V34
MANE
Match
No Match
Transcript ID
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000644079 1 40.63 28.23 retained_intron 0




GSE  ENSG00000188153_COL4A5



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