| CPG ID : 02_0715_00 | Gene Name : pre-mRNA processing factor 40 homolog A | |
|---|---|---|
| NCBI Gene ID : 55660 | NCBI RefSeq : NM_001365597 | NCBI Protein: NP_001352526 |
|---|---|---|
| MANE Gene ID : ENSG00000196504 | MANE Select ID : ENST00000545856 | MANE Protein ID : ENSP00000444656 |
| Chromosome : NC_000002.12 | Start : 152651732 | End : 152717461 |
| Strand : - | MANE Plus Clinical : |
| GENCODE V26 | GTEx V8 | GTEx V9 | GSE | GENCODE V34 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MANE Match |
Tx-Type | CDS length |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Rank | TPM | Exp Tx% |
Tx |
Tx-Type | CDS length |
PC Tx% |
APPRIS | |
| ENST00000410080 | protein_coding | 2793 | 1 | 9.22 | 37.06 | ☀ | 1 | 35.63 | 87.67 | ☀ | 1 | 437.34 | 94.91 | ☀ | protein_coding | 2793 | 96.39 | P:1 | |
| ENST00000471167 | retained_intron | 0 | 2 | 7.61 | 30.61 | 8 | 0.02 | 0.05 | 4 | 1.68 | 0.36 | retained_intron | 0 | ||||||
| ☀ | ENST00000545856 | protein_coding | 1345 | 3 | 1.66 | 6.68 | 2 | 2.69 | 6.62 | 2 | 15.28 | 3.32 | protein_coding | 1358 | 3.37 | ||||
| ENST00000471701 | retained_intron | 0 | 4 | 1.62 | 6.53 | 9 | 0.00 | 0.00 | 3 | 2.80 | 0.61 | retained_intron | 0 | ||||||
| ENST00000493468 | protein_coding | 1041 | 5 | 1.33 | 5.36 | 5 | 0.34 | 0.82 | 5 | 1.08 | 0.24 | protein_coding | 1041 | 0.24 | |||||
| ENST00000489741 | retained_intron | 0 | 6 | 0.88 | 3.54 | 4 | 0.80 | 1.97 | 11 | 0.17 | 0.04 | retained_intron | 0 | ||||||
| ENST00000450303 | retained_intron | 0 | 7 | 0.75 | 3.03 | 3 | 0.83 | 2.03 | 10 | 0.27 | 0.06 | retained_intron | 0 | ||||||
| ENST00000354363 | nonsense_mediated_decay | 328 | 8 | 0.70 | 2.83 | 6 | 0.27 | 0.65 | 6 | 0.69 | 0.15 | nonsense_mediated_decay | 306 | ||||||
| ENST00000467114 | retained_intron | 0 | 9 | 0.49 | 1.96 | 8 | 0.53 | 0.12 | retained_intron | 0 | |||||||||
| ENST00000486100 | processed_transcript | 0 | 10 | 0.40 | 1.59 | 7 | 0.06 | 0.16 | 9 | 0.40 | 0.09 | processed_transcript | 0 | ||||||
| ENST00000472760 | retained_intron | 0 | 11 | 0.16 | 0.64 | 7 | 0.57 | 0.12 | retained_intron | 0 | |||||||||
| ENST00000448428 | protein_coding | 490 | 12 | 0.04 | 0.17 | 10 | 0.00 | 0.00 | |||||||||||