CPG ID : 02_0715_00 Gene Name : pre-mRNA processing factor 40 homolog A
NCBI Gene ID : 55660 NCBI RefSeq : NM_001365597 NCBI Protein: NP_001352526
MANE Gene ID : ENSG00000196504 MANE Select ID : ENST00000545856 MANE Protein ID : ENSP00000444656
Chromosome : NC_000002.12 Start : 152651732 End : 152717461
Strand : - MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000410080 protein_coding 2793 1 9.22 37.06 1 35.63 87.67 1 437.34 94.91 protein_coding 2793 96.39 P:1
ENST00000471167 retained_intron 0 2 7.61 30.61 8 0.02 0.05 4 1.68 0.36 retained_intron 0
ENST00000545856 protein_coding 1345 3 1.66 6.68 2 2.69 6.62 2 15.28 3.32 protein_coding 1358 3.37
ENST00000471701 retained_intron 0 4 1.62 6.53 9 0.00 0.00 3 2.80 0.61 retained_intron 0
ENST00000493468 protein_coding 1041 5 1.33 5.36 5 0.34 0.82 5 1.08 0.24 protein_coding 1041 0.24
ENST00000489741 retained_intron 0 6 0.88 3.54 4 0.80 1.97 11 0.17 0.04 retained_intron 0
ENST00000450303 retained_intron 0 7 0.75 3.03 3 0.83 2.03 10 0.27 0.06 retained_intron 0
ENST00000354363 nonsense_mediated_decay 328 8 0.70 2.83 6 0.27 0.65 6 0.69 0.15 nonsense_mediated_decay 306
ENST00000467114 retained_intron 0 9 0.49 1.96 8 0.53 0.12 retained_intron 0
ENST00000486100 processed_transcript 0 10 0.40 1.59 7 0.06 0.16 9 0.40 0.09 processed_transcript 0
ENST00000472760 retained_intron 0 11 0.16 0.64 7 0.57 0.12 retained_intron 0
ENST00000448428 protein_coding 490 12 0.04 0.17 10 0.00 0.00



GSE  ENSG00000196504_PRPF40A



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