CPG ID : 06_0263_00 Gene Name : coiled-coil alpha-helical rod protein 1
NCBI Gene ID : 54535 NCBI RefSeq : NM_001105564 NCBI Protein: NP_001099034
MANE Gene ID : ENSG00000204536 MANE Select ID : ENST00000396268 MANE Protein ID : ENSP00000379566
Chromosome : NC_000006.12 Start : 31142439 End : 31157802
Strand : - MANE Plus Clinical :
GSE All Transcripts GTEx v9 GTEx v8
Rank TPM Exp
Tx%
Ref
Tx
Tau Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS MANE
Select
Transcript ID Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type
(GENCODE v26)
CDS
length
1 36.03 93.08 0.930 protein_coding 2349 94.06 P:2 ENST00000376266 1 0.29 54.27 1 9.65 51.06 protein_coding 2349
2 2.18 5.62 0.958 protein_coding 2616 5.68 A:2 M ENST00000396268 4 0.04 6.97 2 1.62 8.58 protein_coding 2616
ENST00000467553 3 1.25 6.62 retained_intron 0
ENST00000480060 3 0.04 7.34 4 0.95 5.01 processed_transcript 0
ENST00000426967 5 0.61 3.23 protein_coding 650
ENST00000509552 5 0.02 3.90 6 0.58 3.09 retained_intron 0
6 0.07 0.17 0.966 protein_coding 108 0.17 ENST00000506831 9 0.01 1.50 7 0.56 2.96 protein_coding 108
ENST00000508852 11 0.01 1.01 8 0.52 2.76 nonsense_mediated_decay 243
3 0.17 0.43 0.948 retained_intron 0 ENST00000475684 2 0.10 17.65 9 0.35 1.85 retained_intron 0
ENST00000451521 13 0.00 0.20 10 0.35 1.85 protein_coding 2508
ENST00000486060 11 0.26 1.35 retained_intron 0
ENST00000428174 12 0.25 1.33 protein_coding 380
ENST00000455279 7 0.01 1.67 13 0.25 1.33 protein_coding 458
ENST00000507459 10 0.01 1.47 14 0.25 1.30 nonsense_mediated_decay 243
ENST00000502557 14 0.00 0.18 15 0.23 1.23 protein_coding 356
ENST00000396263 6 0.01 1.76 16 0.20 1.08 protein_coding 2190
ENST00000507829 17 0.14 0.73 protein_coding 347
ENST00000512418 12 0.00 0.33 18 0.13 0.68 nonsense_mediated_decay 135
ENST00000507226 16 0.00 0.08 19 0.12 0.64 protein_coding 288
7 0.03 0.09 1.000 protein_coding 479 0.09 ENST00000508683 8 0.01 1.57 20 0.12 0.63 protein_coding 479
ENST00000513222 21 0.10 0.51 protein_coding 421
ENST00000505392 22 0.09 0.50 retained_intron 0
ENST00000448141 15 0.00 0.10 23 0.09 0.49 protein_coding 574
ENST00000503934 24 0.06 0.34 protein_coding 419
ENST00000488920 25 0.04 0.21 nonsense_mediated_decay 243
ENST00000507892 26 0.03 0.18 protein_coding 123
ENST00000448162 27 0.03 0.18 protein_coding 565
4 0.13 0.34 0.966 retained_intron 0 ENST00000464012 28 0.03 0.15 retained_intron 0
ENST00000507751 29 0.01 0.08 protein_coding 474
ENST00000503420 30 0.01 0.05 protein_coding 379

GSE
MANE
Select
No Match
Transcript ID
Rank TPM Exp
Tx%
Ref
Tx
Tau Tx-Type
(GENCODE v34)
CDS
length
PC
Tx%
APPRIS
ENST00000652427 5 0.10 0.26 0.965 nonsense_mediated_decay 1140



GSE  ENSG00000204536_CCHCR1



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