CPG ID : 05_0229_00 Gene Name : survival of motor neuron 2, centromeric
NCBI Gene ID : 6607 NCBI RefSeq : NM_017411 NCBI Protein: NP_059107
MANE Gene ID : ENSG00000205571 MANE Select ID : ENST00000380743 MANE Protein ID : ENSP00000370119
Chromosome : NC_000005.10 Start : 70049669 End : 70077595
Strand : + MANE Plus Clinical :
GENCODE V26 GTEx V8 GTEx V9 GSE GENCODE V34
MANE
Match
Transcript ID Tx-Type CDS
length
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Rank TPM Exp
Tx%
Ref
Tx
Tx-Type CDS
length
PC
Tx%
APPRIS
ENST00000626847 protein_coding 849 1 10.21 47.94 1 2.92 38.79 1 39.36 54.74 protein_coding 849 56.56
ENST00000380743 protein_coding 885 2 2.50 11.77 3 2.15 28.63 2 23.79 33.09 protein_coding 885 34.19 P:1
ENST00000380742 protein_coding 789 3 2.50 11.73 2 2.33 30.92 4 1.55 2.15 protein_coding 789 2.22
ENST00000505346 retained_intron 0 4 1.92 9.03 5 0.02 0.27
ENST00000508258 retained_intron 0 5 1.44 6.75 8 0.27 0.37 retained_intron 0
ENST00000509805 retained_intron 0 6 0.88 4.12 10 0.12 0.16 retained_intron 0
ENST00000514914 retained_intron 0 7 0.48 2.25 7 0.01 0.16 5 1.48 2.06 retained_intron 0
ENST00000506734 nonsense_mediated_decay 885 8 0.39 1.85 6 0.02 0.21 7 0.37 0.52 nonsense_mediated_decay 885
ENST00000638794 protein_coding 846 9 0.30 1.39
ENST00000614240 protein_coding 789 10 0.21 0.99 9 0.17 0.23 protein_coding 789 0.24
ENST00000507458 nonsense_mediated_decay 139 11 0.14 0.64 4 0.07 0.94
ENST00000380741 protein_coding 885 12 0.12 0.54 8 0.00 0.05 3 3.78 5.26 protein_coding 885 5.44 P:1
ENST00000503678 retained_intron 0 13 0.11 0.51 11 0.08 0.12 retained_intron 0
ENST00000628696 protein_coding 885 14 0.05 0.22 10 0.00 0.01 6 0.94 1.30 protein_coding 885 1.35
ENST00000511812 protein_coding 684 15 0.03 0.13 9 0.00 0.01
ENST00000511873 nonsense_mediated_decay 240 16 0.03 0.12



GSE  ENSG00000205571_SMN2



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